Gene Csal_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2258 
Symbol 
ID4026068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2536669 
End bp2537199 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content56% 
IMG OID637967462 
Producthypothetical protein 
Protein accessionYP_574307 
Protein GI92114379 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0708616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTG ATGCGTACTT GAAAATCGAT GGTATTCCCG GCGAGAGCCT GGATGACAAG 
CATCCGGACT GGATCGAGCT GAAGAGCTTT GATTTCGGGG CCAGCCAGGC AACGTCCGCT
ACCGCCAGTT CGTCCGGTGG TGCTTCCGCA GAACGCGTGA ACCTGAGCGA GTTTCGTATC
CAGAAATTCG TCGACAAGGC CTCCGCCAAA TTGTTCGAGT CCTGCTGTAA AGGTCAGCAC
ATCAAGGAAG TGGTGCTGCA TGTCAACCGC GCCGGTGGCG ACAAGGTGCG TTACATGGAA
ATCAAGCTGG AGGAAGTGAT CGTGTCTTCC ACCGAGATGG AAGGGACCTC GACGGCCACT
GGCTTCGAAC AGGGCGAAAA CGAAGATCGC CATGATCTGC CCTTCGAGAC GGTCAAGTTC
AACTACGCGC GGATCAAGAT CACCTACACC CAGCAGAAGC GCTCCGACGG TCAGGGCGGC
GGCAATGTTG CCGGTGGCTG GGACCGCACC CGCAACAAGG TTTATTCCTA A
 
Protein sequence
MAFDAYLKID GIPGESLDDK HPDWIELKSF DFGASQATSA TASSSGGASA ERVNLSEFRI 
QKFVDKASAK LFESCCKGQH IKEVVLHVNR AGGDKVRYME IKLEEVIVSS TEMEGTSTAT
GFEQGENEDR HDLPFETVKF NYARIKITYT QQKRSDGQGG GNVAGGWDRT RNKVYS