Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2258 |
Symbol | |
ID | 4026068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 2536669 |
End bp | 2537199 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637967462 |
Product | hypothetical protein |
Protein accession | YP_574307 |
Protein GI | 92114379 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0708616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTTG ATGCGTACTT GAAAATCGAT GGTATTCCCG GCGAGAGCCT GGATGACAAG CATCCGGACT GGATCGAGCT GAAGAGCTTT GATTTCGGGG CCAGCCAGGC AACGTCCGCT ACCGCCAGTT CGTCCGGTGG TGCTTCCGCA GAACGCGTGA ACCTGAGCGA GTTTCGTATC CAGAAATTCG TCGACAAGGC CTCCGCCAAA TTGTTCGAGT CCTGCTGTAA AGGTCAGCAC ATCAAGGAAG TGGTGCTGCA TGTCAACCGC GCCGGTGGCG ACAAGGTGCG TTACATGGAA ATCAAGCTGG AGGAAGTGAT CGTGTCTTCC ACCGAGATGG AAGGGACCTC GACGGCCACT GGCTTCGAAC AGGGCGAAAA CGAAGATCGC CATGATCTGC CCTTCGAGAC GGTCAAGTTC AACTACGCGC GGATCAAGAT CACCTACACC CAGCAGAAGC GCTCCGACGG TCAGGGCGGC GGCAATGTTG CCGGTGGCTG GGACCGCACC CGCAACAAGG TTTATTCCTA A
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Protein sequence | MAFDAYLKID GIPGESLDDK HPDWIELKSF DFGASQATSA TASSSGGASA ERVNLSEFRI QKFVDKASAK LFESCCKGQH IKEVVLHVNR AGGDKVRYME IKLEEVIVSS TEMEGTSTAT GFEQGENEDR HDLPFETVKF NYARIKITYT QQKRSDGQGG GNVAGGWDRT RNKVYS
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