| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2195 |
|---|
| Symbol | |
|---|
| ID | 4026386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2471020 |
|---|
| End bp | 2472549 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637967400 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
|---|
| Protein accession | YP_574245 |
|---|
| Protein GI | 92114317 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCG ATACTCAGCG TCTGGTGGAC GTCCTGGCCT GGCTATGGCC CGCGCAGGCC
ACGTCAGCGC GACTCGACGA ATGGCGCCCG CAGCGGGAGC GTTGTGCGGT GACGCTGGAC
AGCCGCGAGG CGGGGCCCGG CGTGCTTTTC GTGGCGGTGC CGGGCGTGCA TGCCGACGGA
CGGGACTTCG TGGCCCAGGC GCTGGAAGCC GGCGTGGAGG CCGTGCTTTG CGAGGCGGAG
GCATTGCCCA CGTCCGTGCC GGAGCAGGAG GCGCGCGTTC TGGCCGTGCC GGGGTTGCGC
GGTCAGCTCG GTGAGCTGGG GCGTCACGTG TTCGCGGTGC CTGCGTCGCT CGAACTGATC
GGCGTCACCG GAACCAACGG CAAGAGTTCC GTGACCCACT ATCTCGCTGC GCTGTCCGAG
GCGCTCGGCA CGCCGGCGGC GGTGATCGGC ACGCTGGGTG TCGGGCGTCC CCAGCATCTT
CGGCCGGCCC GGTTGACCAC CCCGGGGCCG CTGGCGCTGC AGTCGGCGCT GGGCGAACTG
AGCGCCGAGG GCGTCGGTCG CGTGGCCATG GAGGTATCGT CGCATGCGCT CGAGCAGGGG
CGAGTGACGG GGTGCCGTTT CCACGCGGCG GTATATACCA ATCTCAGCCG GGACCACCTC
GATTATCATG GCAGCATGGC GGCCTACGCG GCGGCCAAGG CGCGTCTGTT CCAGCATCGC
GAGCTTGCCC TGGCGGTGGT CAACGGGGAC GACCGGCTGT CGCCACTCAT GCTGGCGGGG
CTGGCAAAGG GCGTCCGGGT GCTCGCCACC GGCACGCAGG AGGCCACGAC CCTGCGCGTC
ATCGACTGGT TCCCCCATGC CCAGGGCCAG CGTGCCCTGA TTGCGACGCC GGAAGGCGAG
ATCGAGCTCG ACCTGTCATT GCTGGGGCGT TTCAATCTCG ACAATGTCCT GCTGGCGATA
GCGACGCTTT ACGGCATGGG CGCCGAGCTG AATGCCTTGT TCTCGGCCGC CGCCCGTCTC
GCGCCGGTGC CGGGGCGCAT GCAGCGCTTG GTGGCGGAGA ACGCTCCCAC GGTCGTCGTG
GACTATGCAC ATACGCCGGA CGCCCTGCGC AATGCACTGG AGGCCTTGCG TGCACACCTG
CCCAGCAGCG ACGGTGCCAA GCTTTGGTGC GTGTTCGGTT GCGGCGGCGA CCGGGACCGC
GGCAAGCGCC CCTTGATGGC GCAGGCTGCG GAGGCGCTGG CCGACCGCCT GGTGATCAGC
GACGACAATC CGCGTGGCGA GCCCGCTGCA GCGATTCGCG ACGAGATCGC CGCGGGGCTC
TCGACCGACG GCCGAGCGCG GGCGGAGTGC ATGGGCGGCC GACGAGAGGC CATCGAGTGG
ACGCTGGACG CCGCCGGCGA GCACGACATC GTTCTGATTG CCGGCAAGGG GCACGAGACC
TACCAGGAAA TCGCCGGGGA ACGTCATCCG TTCAGCGATA TCGATATCGC CCGCGAGGCG
CTCGACCGGC GTGGGGCGCG ACAGGCATGA
|
|---|
| Protein sequence | METDTQRLVD VLAWLWPAQA TSARLDEWRP QRERCAVTLD SREAGPGVLF VAVPGVHADG
RDFVAQALEA GVEAVLCEAE ALPTSVPEQE ARVLAVPGLR GQLGELGRHV FAVPASLELI
GVTGTNGKSS VTHYLAALSE ALGTPAAVIG TLGVGRPQHL RPARLTTPGP LALQSALGEL
SAEGVGRVAM EVSSHALEQG RVTGCRFHAA VYTNLSRDHL DYHGSMAAYA AAKARLFQHR
ELALAVVNGD DRLSPLMLAG LAKGVRVLAT GTQEATTLRV IDWFPHAQGQ RALIATPEGE
IELDLSLLGR FNLDNVLLAI ATLYGMGAEL NALFSAAARL APVPGRMQRL VAENAPTVVV
DYAHTPDALR NALEALRAHL PSSDGAKLWC VFGCGGDRDR GKRPLMAQAA EALADRLVIS
DDNPRGEPAA AIRDEIAAGL STDGRARAEC MGGRREAIEW TLDAAGEHDI VLIAGKGHET
YQEIAGERHP FSDIDIAREA LDRRGARQA
|
|---|
| |