Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2146 |
Symbol | |
ID | 4026486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 2417369 |
End bp | 2419333 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637967351 |
Product | DNA topoisomerase III |
Protein accession | YP_574196 |
Protein GI | 92114268 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.232139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTGA TCATCGCCGA AAAACCCAGC CTGGCACGAG CCATCGCCGA TGCCCTGCCA ACGGCGCCGC AGCGCCATGA GGGCTACCTG GTGTGCGGGG AGACCTGCAT CAGCTGGTGC GTGGGACATC TCCTCGAGCA GGCACCGCCC GACGCCTACG ACGCCCGCTA TCAGCAATGG CGTCTGGATC ATCTGCCCAT CGTGCCCCGG CAATGGAAGC TGATCCCGCG TTCCAAGGCG CGCGCGCAGC TGGCGGTGAT TCGCAAGCTG CTCAAGCGTG CCGACACCGT CGTGCACGCC GGCGACCCCG ACCGCGAGGG GCAACTGCTG GTGCAACAGG TGATCGCGCA TCTGGGCTGG CGCGGCTCGA TCTCGCGCCT GCTGGTCAGC GACCTCAATC GCCCCGCCGT GCGCCAGGCC CTGCAGTGCA TCGAGGACAA TGCGCGTTAT CAATCGCTGT TCGAGGCCGC CGAGGCCCGT TCGAGGGCCG ACTGGGTATA TGGCATCAAT CTGTCTCGCG CCTGGACCCT CACCGGTCGC CAGGCCGGCT ATCAGGGCGT CCTGTCGGTC GGCCGCGTGC AAACCCCGGT GCTGGGGCTC ATCGTGCGCC GCGACCTGGA CATCGAAGCC TTCACGCCAC GCCCTTTCTA CCCCCTGTGG GCGGACCTGA AGGTCGAGCA CGGAACCCTG CGTGCCTGGT GGCAACCGCA AGCCCCCCAC CCACTCGACG AGCAGGGCCG ACTGCTCGAG CGCGCCCCGG CCGAGGCCCT GGCGGCCCAT CTGCCCGGCG CCGAGGGCCA CCTGAGCGAG TTGCAGAGCA AGCGACAGAC GCAATCGGCA CCGTTGCCGT ATTCGCTTTC TGCCCTGCAG GTCGATGCCG CGCGCCGCTA CAAGTTGCCG GCCAAGCGCG TGCTGGATAT CTGCCAGACA CTCTATGAAC GCCACCAGTT GATCACCTAT CCGCGTTCGG ATTGCCGCTA CCTGCCCGAG GGGCATTTCG CCGCGGCGAA GAAGACGCTG GACACGGCCT GCGCCCAGGA CGCCACCCTG CGCGGGTGGT ATCAAGGGGC GGATTTTTCG CGCCGTTCGC GCGCCTGGAA CGACAAGCAG GTCGGCGCCC ACCACGCCCT GGCACCCACC GGGCGGACGT TCGACGCCTC CCGCCTGACC GGCGACGAGG CCAATGTCTT TCGTCTGATT GCGCGCAACG TGCTGGCGCA GTTCTATTCA CCGCTGGTGA CCCGCGACGT CAAGGCAGCG TTCTCGATTC ACGGCGAGCA CTTTCGTGCC CAGGGGCGCG AGATTCTCGA GCCTGGCTGG AAGCCGCTCT TCACGACGCG CGACGAGGCC CCGCCCTTGC CCGCGCTGCA CGAAGGCGAG GCGGCACGGG TCGTCGACTG CGCGGTGGAG GATCGTCAGA CACGGCCGCC GGATCCCTTC ACCGATGCCA GCCTGATCAA GGCCATGATG AACATCGCCC GCTACGTCGA CGACGCCACG GTCAAGCGTA CCTTGCGGGA TACCGACGGA CTGGGGACCG AGGCCACGCG CGCGGGAATC ATGGAAACCC TCGTCACGCG CGGTTATATC GTGCGTCAGC AAGGCGCGTT ACGTGCCACT CGCACCGGAC GCGCGCTCAT CCAGGCCTTG CCGGATACCG CCACCCGTCC CGAGCGAACG GCACTCTGGG AACAACGTCT TGCCGACATC GCCGAGGGCC GCGGCGATGC GGATGCCTTC CTCGACGCGC TGGTGGGTGA TGTCCGCCAA CTGCTCGACC AGGCGGATGC CGCACGCATG CGCCAGGCGC TGGCCACCAC CGGCGGTGCC GAGCCGAGCT CGCCCTCGCG GGGCAAGAAG CGCGGCACCC GGCGCGGCAG CGGCGACGCC TCGTCCAGCC CCCGACGCCG CGCCGGGAAG TCCACGGCCA GGCGTCGCAC CTCCTCCAAG AAAGGCCAGA CATGA
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Protein sequence | MRLIIAEKPS LARAIADALP TAPQRHEGYL VCGETCISWC VGHLLEQAPP DAYDARYQQW RLDHLPIVPR QWKLIPRSKA RAQLAVIRKL LKRADTVVHA GDPDREGQLL VQQVIAHLGW RGSISRLLVS DLNRPAVRQA LQCIEDNARY QSLFEAAEAR SRADWVYGIN LSRAWTLTGR QAGYQGVLSV GRVQTPVLGL IVRRDLDIEA FTPRPFYPLW ADLKVEHGTL RAWWQPQAPH PLDEQGRLLE RAPAEALAAH LPGAEGHLSE LQSKRQTQSA PLPYSLSALQ VDAARRYKLP AKRVLDICQT LYERHQLITY PRSDCRYLPE GHFAAAKKTL DTACAQDATL RGWYQGADFS RRSRAWNDKQ VGAHHALAPT GRTFDASRLT GDEANVFRLI ARNVLAQFYS PLVTRDVKAA FSIHGEHFRA QGREILEPGW KPLFTTRDEA PPLPALHEGE AARVVDCAVE DRQTRPPDPF TDASLIKAMM NIARYVDDAT VKRTLRDTDG LGTEATRAGI METLVTRGYI VRQQGALRAT RTGRALIQAL PDTATRPERT ALWEQRLADI AEGRGDADAF LDALVGDVRQ LLDQADAARM RQALATTGGA EPSSPSRGKK RGTRRGSGDA SSSPRRRAGK STARRRTSSK KGQT
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