Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2102 |
Symbol | |
ID | 4029245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 2370500 |
End bp | 2371327 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637967301 |
Product | lipoprotein YaeC |
Protein accession | YP_574152 |
Protein GI | 92114224 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000812987 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCC CTCTGGCTCA CGTTCTACGC CCCGCGCGTC TGCTCGGCGC CGCGGCACTG CTGGGTGCCG GCCTGATCGC CGGCTGCGGC GGTGACGATG CCGAGACGCA GTCGATCAAG GTAGGCACCG TGGCCGGCCC GGAAACGGAC GTCATGCAAG TCGCCAAGCA GATCGCCAAG GACGAATACG GCCTCGACGT CGAGATCGTC GAGTTCACCG ACTACGTCTC GCCCAACGCC GCACTGGCCG ATGGCAGCCT GGACGCCAAC GCGTTTCAGC ATGAGCCCTA TCTGAACAGC ATGGTCGAGG ATCGCGGCTA CGACTTCGCC ATCGCCGGCA AGACCTTCGT CTACCCGATC GGCGCCTACT CCGAGCGCTA CGACGACATC GCCGACCTCC CGGATGGTGC GAGCATAGCG CTGCCCAACG ACCCGTCCAA CGAGGGGCGT TCGCTGATCC TGATGCACAA CGAGGGCCTC ATCGAGCTCA ACGACCCCGA GAATCTCGAA GCCACGCCGA TCGACATCAG CAACAACCCG CATGACTATG AGTTCCGCGA GATCGAAGCC GCGCAATTGC CGCGCGTGCT GCCCGATGTC GACCTGGCAT TCATCAACAA CACCTTCGCG CAGCCGGCGG GCCTCAGCCT CGATGACGCG CTGATCAAGG AAGGTCCCGA ATCGCCTTAC GTCAACCTGA TCGTGACGCG CGAAGGCAAG CAGGATGACG AGGCGATCCA GAACCTGGTC AAGGCCTACC AGTCGCAAGC AGTCATCGAC AAGGCCGACG AACTGTTCAA GGGCGCCGCG GTTCCCGGCT GGAAGTAA
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Protein sequence | MNTPLAHVLR PARLLGAAAL LGAGLIAGCG GDDAETQSIK VGTVAGPETD VMQVAKQIAK DEYGLDVEIV EFTDYVSPNA ALADGSLDAN AFQHEPYLNS MVEDRGYDFA IAGKTFVYPI GAYSERYDDI ADLPDGASIA LPNDPSNEGR SLILMHNEGL IELNDPENLE ATPIDISNNP HDYEFREIEA AQLPRVLPDV DLAFINNTFA QPAGLSLDDA LIKEGPESPY VNLIVTREGK QDDEAIQNLV KAYQSQAVID KADELFKGAA VPGWK
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