Gene Csal_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2088 
Symbol 
ID4026550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2356903 
End bp2358141 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content65% 
IMG OID637967287 
Producturacil-xanthine permease 
Protein accessionYP_574138 
Protein GI92114210 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCG ACGATACGGC AACCATGCCG ACCGACACCC CGCTACGCAC CTTGATCACG 
GGGGCGCAGA TGCTGTTCGT GGCCTTCGGT GCGCTGGTGC TGGTGCCCTT GCTGACGGGA
CTGGATCCCA GCGTGGCCTT GTTCACGGCG GGCATCGGCA CGCTGCTCTT CCAGTTCGTC
ACCCAGCGCA GCATTCCGGT GTTCCTGGCA TCGTCGTTCG CCTTCATCGC GCCCATTCAA
GGGTCGGTGG CCAGCTACGG CATTCCTGCC ACATTGGGTG GCCTGTTCGT GGCCGGGCTG
GTGTACGTGG CAATCTCGCA GATCGTGCGC TTGAAGGGGA CGGCCTGGCT GCATCGCCTG
CTGCCCTCGG TCGTGGTGGG GCCGGTGATC ATGGTGATCG GCCTGGCCCT GGCGCCGGTC
GCGGTGGACA TGGCCACCGG ACAGAACAGC GACATGGGCT ATGGCCAGGC CATCACGCTG
TCGATGGTCA GTCTGCTGGT CACCCTGGTA CTGGCGGTAT TCGGGCGCGG CCTGATCCGT
CTGATTCCGA TCATGGGCGG GATCGTGGTC GGCTATGCAC TGGGCCTGGC GATGGGCGTG
ATCGATCTCT CGCCGGTGCA CGACGCCGCC TGGCTGGCAT TGCCGGATTT CGTGGCCCCG
ACCTTCAATC TCGCGGCGAT CCTGTTCATG ATTCCGGTGG CCATCGCGCC GGTGATCGAG
CACATCGGCG ACATGGTCGC GATCGGTTCG GTGACGCGTC GCAATTATCT GGAGAAGCCC
GGTCTGCAGC GGACCTTGCT GGGCGACGGT CTGGCCACTG CGGTGGCGGC ATTGTTCGGG
GGACCGCCCA ACACCACGTA CTCGGAAGTG ACCGGGGCGG TGACGCTGAC CCGCAACTTC
AATCCCGTGA TCATGATCGT CGCGGCTTGC ACGGCCATCG TGCTGGCCTT CGTCTCCAAG
CTGGGCATGT TGCTGCAGAC CATCCCCACG CCGGTGATGG GAGGCATCAT GACGTTGCTG
TTCGGCTCCA TCGCCGTAGT GGGGATGAAT TCCCTGGTAC GCGGCGGGCA GTCATTGACG
GCGCCACGCA ACCTGGTCGT GGTGTCGTTG ATCCTGGTGT TCGGTATCGG TGGCATGCAG
CTCGGCAGTG GCGAATACGC CCTGCAGGGC GTGAGCCTGG CCGCCCTGGT CGGCATCGTC
CTCAACTGGG TGCTTCCGCC CGCCGCCACC CACGAGTAA
 
Protein sequence
MTTDDTATMP TDTPLRTLIT GAQMLFVAFG ALVLVPLLTG LDPSVALFTA GIGTLLFQFV 
TQRSIPVFLA SSFAFIAPIQ GSVASYGIPA TLGGLFVAGL VYVAISQIVR LKGTAWLHRL
LPSVVVGPVI MVIGLALAPV AVDMATGQNS DMGYGQAITL SMVSLLVTLV LAVFGRGLIR
LIPIMGGIVV GYALGLAMGV IDLSPVHDAA WLALPDFVAP TFNLAAILFM IPVAIAPVIE
HIGDMVAIGS VTRRNYLEKP GLQRTLLGDG LATAVAALFG GPPNTTYSEV TGAVTLTRNF
NPVIMIVAAC TAIVLAFVSK LGMLLQTIPT PVMGGIMTLL FGSIAVVGMN SLVRGGQSLT
APRNLVVVSL ILVFGIGGMQ LGSGEYALQG VSLAALVGIV LNWVLPPAAT HE