Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1999 |
Symbol | |
ID | 4027083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 2257664 |
End bp | 2259379 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637967194 |
Product | ABC transporter related |
Protein accession | YP_574049 |
Protein GI | 92114121 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0994183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCTT CTCGTTCAAC GTCTTCTTCA TCGGCTTCCC CGGCGCGGGC ATCGCGCCGG TGGCTGGCCG AGCAAGCGCG CGACGTGCGT GGCTGGCTGA CGCTCGCCGT GGCCGCGGGG CTCGCCGTGG GTGTCCTGAC GCTGGTCCAG CTCGGCCTGA TGGCATGGCT GATCAGCGGC GTGGTGGCGC GCGATGCGAC GCTGACCTCG CTCTGGCCAT ACGCGGCGGG GCTCGGCGGT ACGGTGCTCC TGCGCGCGCT GGTGCAGTGG GCGCAGGAGA CCTGCGGTCT GGAGGCCGGA CTGCGGGTCA AGGCGCGCGT CAGGGGGCAA CTGCTCGATC ATCTCGCCGC CCTGGGGCCG GTCCGCCTGG CCGAGCGGCA TAGCGCGAGC AGCGCCGGCC AACTGGTCGA CCAGGTGGAA GCGCTGGAAG GCTACGTCGC GCGCTATCTG CCCCAGGCCA CGCTGGCGGT GGCGGTGCCG CTGCTCTTTC TGGGCGTGGC GTTCTGGCTG GATTGGCTGG CGGCATCGTT TCTGCTGCTG GCGGCGCCCT TGATTCCGCT GTTCATGGCA CTGGTGGGGA TGGGAGCGCA GCGCCTCAAC GAGCAGCAGT TCCAGGCCAT GACCCGTCTC GCGGGGCACT TTCTCGACCG GGTGCGCGGA CTCACCACCC TGCAATTGTT CGGCCGCACA TCGCAGGCCA CCGAGGAGGT CGTCGCGGTG GCCGACGATT ACCGACGGCG GAGCATGAAA ACGCTGCGCG TGGCGTTCTT GTCCTCGGCG GTGCTGGAGT TCTTCGCCTC GGTGTCCATC GCCGTGATCG CGATCTACAT CGGCTTCGGC CTGCTGGGCT ACATCCAGTT CGGTCCGGCC GAGCAGCTGA CGCTGTTCAG CGGCCTGTTC CTGCTGTTCA TGGCGCCTGA CTTCTTCCAG CCGCTGCGCC TGCTGGCGCA GCACTATCAT GACCGTGCCA GTGCCCTGGG AGCCGCCGAA GGGCTGCGCG ACCTGCTTGC CCAGACACCG CCGCGCGGTG CCGTCGAGAC CCTGACGGGG GACGCCTCGC CCCGTGCTCG GCTGAGCGAC GTGGTCGTGT CGCATCCCGG ACGAGGCCGT GTGCTGGGGC CATTGGACAT GACCATTGCC GATGGCGACG TGATTGCTCT GGTGGGGCCT TCGGGGGCCG GCAAGTCGAC GCTGTTGCAG GTACTGGCCG GCTTCGTCGA CGCCGAGATC GGTCGCGTCG CCCTGCGCGA GCCCGCGCGT CTCGCCTGGC TCGATCAGCG GCCGTTTCTG ATGCAGGGCA CGCTGGCCGA CAATCTGCGA CTGGTCGCGC CCGAGGCCAG CGACGCGCAG TTGCACGAGG CGCTGGCGGC GGCCCGGCTC GACACGCTGC TGGCCACCTT GCCTCAGGGG CTCGACACGC CGCTCGGTGA GCGCGGATTG GGGCTGTCGG GCGGGCAGGC CAGCCGCCTG GCACTGGCCC GGGTGTTTCT CAGCGATGCC CCGCTGGTGC TGCTCGACGA GCCCACGGCC AGTCTCGATC CCGACAGCGA GCGTCTGGTG ATCGAGGGCT TGGCGTCGCT CGCGGCGCAG GGGCGCACGC TGGTGATCGC CACGCACCAT CCCGCCGTGA TGCGCATGGC CGACCGAGTG CTCGCGCTCG ATGGGGGGCG CTTGACGCCC CGTGCCACCC ACGCTTCGCC GGAGGTGTCA TCATGA
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Protein sequence | MSASRSTSSS SASPARASRR WLAEQARDVR GWLTLAVAAG LAVGVLTLVQ LGLMAWLISG VVARDATLTS LWPYAAGLGG TVLLRALVQW AQETCGLEAG LRVKARVRGQ LLDHLAALGP VRLAERHSAS SAGQLVDQVE ALEGYVARYL PQATLAVAVP LLFLGVAFWL DWLAASFLLL AAPLIPLFMA LVGMGAQRLN EQQFQAMTRL AGHFLDRVRG LTTLQLFGRT SQATEEVVAV ADDYRRRSMK TLRVAFLSSA VLEFFASVSI AVIAIYIGFG LLGYIQFGPA EQLTLFSGLF LLFMAPDFFQ PLRLLAQHYH DRASALGAAE GLRDLLAQTP PRGAVETLTG DASPRARLSD VVVSHPGRGR VLGPLDMTIA DGDVIALVGP SGAGKSTLLQ VLAGFVDAEI GRVALREPAR LAWLDQRPFL MQGTLADNLR LVAPEASDAQ LHEALAAARL DTLLATLPQG LDTPLGERGL GLSGGQASRL ALARVFLSDA PLVLLDEPTA SLDPDSERLV IEGLASLAAQ GRTLVIATHH PAVMRMADRV LALDGGRLTP RATHASPEVS S
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