Gene Csal_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1995 
Symbol 
ID4027079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2252805 
End bp2254082 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content66% 
IMG OID637967190 
Producthydroxyglutarate oxidase 
Protein accessionYP_574045 
Protein GI92114117 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTCTTG AACGAGGCGC GGGCGTTGCC CAGGCTGTCA GGCGTCGAAC CCCGAAGCGA 
GATTATAGAA GCGAGAATGC GGTGTACGAT CTCATCATCA TCGGTGGCGG CATCCTGGGG
ATGTCCACCG CCATGCAGCT CATCGAGGCC TATCCCGACA AGCGCATCCT GCTCGTCGAG
AAGGAGGACG GGCCGGCCTG CCATCAGACC GGCCACAACA GCGGGGTGAT CCATGCCGGC
GTCTATTACA CGCCGGGCAG CCTCAAGGCG CGCTTTTGCC TGGAAGGCAA TCGCGCCACC
AAGGCGTTCT GCGACACCCA CGGCATCGCC TATGAGAGCT GCGGCAAACT GCTGGTCGCC
ACCAACGAGG TGGAAATGCA GCGCATGCGG GCGCTATGGG AGCGAACCGC GGCCAACGGG
CTGGAGCGTG AATGGCTCGA CGCCGATCAA CTCCGCGAGC GCGAGCCCAA CATCATCGGG
CAGGGCGGCA TCTTCGTGCC GGCCAGCGGT ATCGTCGACT ATCGCCAGGT GACGGCGACG
ATGGCCGAGG TGTTCCGGAA CGCCGGCGGC GAGATACGTT ACCAGGCGCC GGTCACGGCC
CTGGAGGAGC GCGACCGGGA GGTCGTGGTC ACCACGGGAC AGGGGGTTTT CACCACGCGT
CACCTGGTGT CGTGCTCGGG GCTGATGGCC GACCGCGTGG TGCGCATGCT GGGCGTGACG
CCCGAGTTCA GCATCTGCCC GTTCCGGGGC GAGTATTACC TGTTACCGCC CGAGCACAAC
CGGATCGTCA ATCATCTGAT CTACCCGATT CCCGACCCCG CGATGCCGTT TCTCGGCGTG
CACCTCACGC GGATGATCGA CGGCACCGTT ACCGTGGGGC CGAACGCCGT GCTGGCGCTC
AAGCGCGAGG GCTATCGCAA GCGTGATATC TCGCTGGGTG ACATTGCATC GATGGCGCGC
GACCCCGGCA TCCGCCGGGT GCTGCGCGCC AATCTCAAGC CGGGCCTGCG CGAGATGAAG
AATTCGCTGT CGAAGGGCGG CTATCTCGAG GAGGTCCGCA AGTATTGCCC CGGCCTGACT
CGCGACGACC TGCGCCCGTA TCCGGCCGGC GTACGCGCCC AGGCGGTCGG CAGGGACGGC
AAGATGATCG ACGACTTCCT GTTCGTCAAC ACACGGCGCA GCGTGAACGT GTGCAACGCG
CCGTCGCCCG CCGCCACCTC GGCGATTCCC ATCGGTGCGC ATATCGTCGA GCAGGTGAGG
GCCCAGGTCG AGGCCTAG
 
Protein sequence
MRLERGAGVA QAVRRRTPKR DYRSENAVYD LIIIGGGILG MSTAMQLIEA YPDKRILLVE 
KEDGPACHQT GHNSGVIHAG VYYTPGSLKA RFCLEGNRAT KAFCDTHGIA YESCGKLLVA
TNEVEMQRMR ALWERTAANG LEREWLDADQ LREREPNIIG QGGIFVPASG IVDYRQVTAT
MAEVFRNAGG EIRYQAPVTA LEERDREVVV TTGQGVFTTR HLVSCSGLMA DRVVRMLGVT
PEFSICPFRG EYYLLPPEHN RIVNHLIYPI PDPAMPFLGV HLTRMIDGTV TVGPNAVLAL
KREGYRKRDI SLGDIASMAR DPGIRRVLRA NLKPGLREMK NSLSKGGYLE EVRKYCPGLT
RDDLRPYPAG VRAQAVGRDG KMIDDFLFVN TRRSVNVCNA PSPAATSAIP IGAHIVEQVR
AQVEA