Gene Csal_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1962 
Symbol 
ID4027202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2219115 
End bp2220131 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content60% 
IMG OID637967158 
Productflagellar motor switch protein FliM 
Protein accessionYP_574013 
Protein GI92114085 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAAG ACGATCTGCT CTCGCAGGAA GAGATCGACG CCCTTCTCAA GGGCGTCAGC 
GGTGACGAGG ATAACGCGCA GGACGAACGG GCCTCGCGCG AGGGGAAAGT GCGTCCGTTC
GACCCCGCCA AGCAGCATCG CATCATTCGC GAGCGGCTTC ATGCGCTGGA CATCATCAAC
GAACGTTTCG CGCGCCAGTT CCGGGTCGCG CTTTTCAACC TGATGCGGCG CAGTGCCGAC
ATCACGGTGG AAAGCGTCCG TTATCAGAGC TATAGCGAAT TTTCGCGGAA CCTGCCGGTC
CCCACCAATC TCAACTTGAT CACCATGAAG CCCCTGCGCG GCTCGGCGCT GGTGGTCTTT
CCGCCGAGCC TGGTGTTCAT GGTGGTCGAC AACCTGTTCG GCGGTGACGG CCGCTTCCTG
ACCAAGTCCG AGGGACGCGA GTTCACGCGA ACCGAACAGC GCATCATCCA TCGCATGCTC
AAGATGGCGC TGGAAGGCTA CAGCGAATCG TGGAAATCGG TCTATCCACT GGACATCGAG
TACACGCGTT CGGAACTGCA GGTGAAGTTC GCCAACATCA CCAACTCGCC GAACGAGATC
GTCGTCAACA GCACCTTCCA CGTGGAGGTC GGCAATCTCT CGAGCGAGTT CAACATCTGC
ATTCCCTACT CGATGATCGA GCCGATTCGC GACATTCTCG CCAGCCCGCT GCACGACACG
CATCCCGACG AGGAGCAGCA GTGGGAAGCG CGCATGGCGC ATGAAATCCG CCACTCGTCC
GTGGAGTTGA CCGCCGACTT CGTCGATATC CCGCTGCGCC TGCGGGATGT GACCCAACTG
TCGGTGGGCG ACATCATTCC CATCGAGCTA CCCGAGGCAG TGAATGTCAG TGTCGACGGC
ATACCCGTGA TGACGTGCGA CTACGGCAGC CAGAAATCCC AGCGCGCCTT GCGCGTCAGG
CACCTCATCG AACACGGCTC GAGCCAAGTT GCAGCGAAGG ATCCGAAAGA TGACTGA
 
Protein sequence
MSQDDLLSQE EIDALLKGVS GDEDNAQDER ASREGKVRPF DPAKQHRIIR ERLHALDIIN 
ERFARQFRVA LFNLMRRSAD ITVESVRYQS YSEFSRNLPV PTNLNLITMK PLRGSALVVF
PPSLVFMVVD NLFGGDGRFL TKSEGREFTR TEQRIIHRML KMALEGYSES WKSVYPLDIE
YTRSELQVKF ANITNSPNEI VVNSTFHVEV GNLSSEFNIC IPYSMIEPIR DILASPLHDT
HPDEEQQWEA RMAHEIRHSS VELTADFVDI PLRLRDVTQL SVGDIIPIEL PEAVNVSVDG
IPVMTCDYGS QKSQRALRVR HLIEHGSSQV AAKDPKDD