Gene Csal_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1936 
Symbol 
ID4025871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp2193296 
End bp2193970 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content61% 
IMG OID637967132 
Producthypothetical protein 
Protein accessionYP_573987 
Protein GI92114059 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGTCC TCGATTCTCG CCAGGCCAGA CGCGTGATGG CGCTGCTCGT CGGTTTTCAC 
ATCGTGGTGA TCGCGGCCAG CAACTATCTG GTACAGCTTC CGTTTTCGCT CTTCGGCTGG 
CATACCACCT GGGGCGCCTT CAGCTTCCCC TTCATCTTTC TGGCCACGGA TCTGACCGTG 
CGTCTGTTCG GCAAGGGGCG CGCCCGATCG ATCATCGCGC GGGTCATGCT GCCGGCATTG 
TTGATCTCGT ACGGCGTGTC GGTGCTCTTT CAGGAAGGGG CTTTCCAGGG CGTTGCGGCT 
CTCGGCGAGT GGAACCTGTT CGTGGGGCGT ATCGCGCTGG CGAGTTTCAT GGCCTATGTA 
CTGGGGCAGT TGCTGGATAT CCATGTCTTC GACCGCCTGA GACGTCTGCG TGCCTGGTGG 
GTCGCGCCGG CCTTTTCGAC CCTGCTGGGC AACCTGGCCG ATACGTTCGC GTTTTTCGCG 
ATCGCGTTCT GGAACGGTCC CAGTGCGTTC ATGAGTGAGC ATTGGGTGGA AATCGCCTGG 
GTGGATTATG CCATCAAGCT GGGGGTGAGC CTGGCCTTCT TCCTGCCGCT CTACGGCATG 
CTGCTGGGGG CGTTGACGCG TCGACTGGCG CATCTGGGGG ATACCAGCGA GGGACTTCAG 
CCACGCAAGG CCTGA
 
Protein sequence
MFVLDSRQAR RVMALLVGFH IVVIAASNYL VQLPFSLFGW HTTWGAFSFP FIFLATDLTV 
RLFGKGRARS IIARVMLPAL LISYGVSVLF QEGAFQGVAA LGEWNLFVGR IALASFMAYV 
LGQLLDIHVF DRLRRLRAWW VAPAFSTLLG NLADTFAFFA IAFWNGPSAF MSEHWVEIAW 
VDYAIKLGVS LAFFLPLYGM LLGALTRRLA HLGDTSEGLQ PRKA