Gene Csal_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1930 
Symbol 
ID4025864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2186946 
End bp2188655 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content64% 
IMG OID637967126 
Productpotassium/proton antiporter 
Protein accessionYP_573981 
Protein GI92114053 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.401785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATACCA TCAACAGCCT TTTCTTGTTT TCGGGTTTCT TGATCGCGCT GAGCATCGTG 
GCAAGCCGCG TCTCGTCGCG GATCGGCGTA CCGCTGTTGG TGCTGTTCCT GGTGCTGGGC
ATGCTGGCCG GTGAGGAAGG CGTGCTGGGA ATCGAGTTCG ACGACTACTC CCTGGCATAC
CTCATCGGGC ATCTGGCGTT GGCGATGATC CTGCTCGACG GCGGCTTGCG GACACGCCTC
AAGACGTTCC GGGTGGGGCT CAAGCCGGCG CTGTCGCTGG CCACGCTTGG GGTGTTCGTC
ACCAGCGGGC TCGTCGGCCT GTGCGCCATG TGGGTGTTCG ATCTGTCTCT GGTCGAAGGC
CTGCTGGTGG GGGCGATCGT CGGATCGACG GATGCCGCCG CGGTCTTCTC GATGCTGGCC
GGACAAGGGG TGACCCTCAA CGAGCGGGTG GGGGCGACGC TCGAAATCGA ATCGGGCACC
AACGACCCCA TGGCGATCTT CCTCACGATC ACGCTGGCCG AGATTCTGGT GGGCAGTGTG
GGCGGGGTCT GGCAAACGCT GATGATGTTC GCCTCGCAGT TCGGGCTGGG CCTCGTGTTC
GGCGTCGGTG GTGGCTGGCT GGCCGCCAAG CTGCTGCGCT GGCTCGATCT CGCGCCCGGG
CTCTATTCCT TGCTGGCGCT TGCCCTGGGC TTTTTGATCT TCGGGGTGAC CAGCGTGGCG
GGCGGCAGCG GCTTTTTGGC GATCTACCTG GCGGGTCTGA TGATCGGCAA CCAGCCGGGA
CGGCATCTGA CCCATATCCT GCCGGTTCAC GATGGGCTGG CCTGGTTGAG CCAGATCGGC
CTCTTTCTGG TGCTGGGGAT GCTGGTGACG CCCAGCGAGA TGATCGACTA TGCCGTGCCC
GGCGCGGTAT TGGCACTGGG CCTGATCTTC GTGGCGCGGC CGCTGGCGGT GCTGATCTCG
CTCAAGCCGT TCTTCAGCTT CCGGTGGCGG GAAATCGGTT TCATTTCCTG GGTCGGGCTG
CGCGGCGCGG TGCCCATCGT GCTGGCGATC TTTCCGGTCA TCGCCGGGGT CGAAAACGCG
ACGCTGTACT TCAACGTGGC GTTCTTCGTG GTCCTGATAT CATTGTTGAT GCAAGGCGCG
TCACTGGCGC GGGTGGCACG CCTGATGCGC GTCGAGGTGC CGGCAGGCGC CACGCCCAAC
CGCCGTGGTC CGCTGGGCGT GCTGCCCGAA AACGATTACG AGATGTTCGT CTACAAGGTG
GAGAACGAAG CGCTGGAAGA CGTCCCCATC CGGCTGCTGC GGTTTCCCTC CGGGGCCCTG
ATTTCCGGGC TGTTTCGTCA GCATGCGATG TTGCACGCCA AGGGCAGCAC GCGGCTGAAG
CTCAATGACG TCATCTGCGT CATCGGGCGC AGCGATGACT TGCCGGCGCT CAACCGCCTG
TTCAACGGCG ACGCCACCCT CAAGCGTGAA AGGGCGTTCT TCGGTACGTT CACGCTGGAT
GGAGAAGCCA TGATGAGCGA TGTGGCGGAC GCGTACGGTC TGACGTTGAG CCCCGGTGAG
CGGGACATGA CGCTGGGCGA ATTCGTGGCG CTACGCGTCG GTGGGCATCC CGTGGTGGGG
GACGACGTCG ATTGGCATGG CTTTCATTGG GTGGTCAATG CCGTGCAGGG CAATCGCGTG
ACGCGGGTCG GGCTCAGGCT CTATCACTGA
 
Protein sequence
MDTINSLFLF SGFLIALSIV ASRVSSRIGV PLLVLFLVLG MLAGEEGVLG IEFDDYSLAY 
LIGHLALAMI LLDGGLRTRL KTFRVGLKPA LSLATLGVFV TSGLVGLCAM WVFDLSLVEG
LLVGAIVGST DAAAVFSMLA GQGVTLNERV GATLEIESGT NDPMAIFLTI TLAEILVGSV
GGVWQTLMMF ASQFGLGLVF GVGGGWLAAK LLRWLDLAPG LYSLLALALG FLIFGVTSVA
GGSGFLAIYL AGLMIGNQPG RHLTHILPVH DGLAWLSQIG LFLVLGMLVT PSEMIDYAVP
GAVLALGLIF VARPLAVLIS LKPFFSFRWR EIGFISWVGL RGAVPIVLAI FPVIAGVENA
TLYFNVAFFV VLISLLMQGA SLARVARLMR VEVPAGATPN RRGPLGVLPE NDYEMFVYKV
ENEALEDVPI RLLRFPSGAL ISGLFRQHAM LHAKGSTRLK LNDVICVIGR SDDLPALNRL
FNGDATLKRE RAFFGTFTLD GEAMMSDVAD AYGLTLSPGE RDMTLGEFVA LRVGGHPVVG
DDVDWHGFHW VVNAVQGNRV TRVGLRLYH