| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1877 |
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| Symbol | |
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| ID | 4028240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 2134894 |
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| End bp | 2136165 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637967071 |
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| Product | diaminobutyrate--2-oxoglutarate aminotransferase |
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| Protein accession | YP_573928 |
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| Protein GI | 92114000 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases
[TIGR02407] diaminobutyrate--2-oxoglutarate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000384013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACCC AGATTCTCGA ACGCATGGAA TCCGAAGTCC GGACCTATTC ACGTTCTTTT
CCTACCGTTT TCACTGAAGC CAAGGGCGCG CGCCTGCATG CCGAGGACGG CAACCAGTAC
ATCGATTTTC TCGCCGGCGC CGGCACGCTC AACTACGGTC ACAACCACCC CAAGCTCAAG
CAGGCACTGG CCGATTACAT CGCCTCCGAT GGCATCGTCC ATGGTCTGGA CATGTGGAGC
GCGGCCAAGC GCGACTATCT GGAAACCCTC GAAGAGGTGA TCCTCAAGCC GCGTGGCCTG
GATTACAAGG TTCATCTGCC GGGCCCGACG GGCACCAATG CCGTGGAAGC CGCCATTCGA
CTGGCGCGCA ACGCCAAGGG TCGTCACAAC ATCGTCACCT TCACCAACGG ATTCCATGGC
GTGACCATGG GCGCGCTGGC CACCACCGGC AATCGCAAGT TCCGTGAAGC CACCGGCGGT
ATCCCGACCC AGGGCGCCAG CTTCATGCCG TTCGATGGCT ACATGGGCGA GGGCGTCGAC
ACCCTGAGCT ACTTCGAGAA ACTGCTCGGC GACAACTCCG GTGGTCTCGA CGTTCCCGCG
GCCGTGATCA TCGAGACGGT GCAGGGCGAG GGCGGTATCA ATCCGGCCGG CATCCCGTGG
CTGCAGCGCC TGGAAAAGAT CTGCCGCGAT CACGACATGC TGCTGATCGT CGACGACATT
CAGGCCGGCT GCGGTCGTAC GGGCAAGTTC TTCAGCTTCG AGCATGCCGG CATCACGCCG
GACATCGTCA CCAACTCCAA GTCCCTGTCG GGTTTCGGCC TGCCGTTCGC GCATGTGCTG
ATGCGCCCGG AACTGGATAT CTGGAAGCCC GGCCAGTACA ACGGCACGTT CCGTGGTTTC
AACCTGGCCT TCGTCACGGC CGCCGCCGCG ATGCGTCACT TCTGGAGCGA CGACACCTTC
GAGCGCGACG TTCAGCGCAA GGGCCGTGTG GTCGAGGATC GCTTCCAGAA GCTTGCCAGC
TTCATGACCG AGAAAGGGCA TCCGGCCAGC GAGCGTGGCC GTGGCCTGAT GCGTGGCCTG
GACGTCGGTG ACGGCGACAT GGCCGACAAG ATCACCGCAC AAGCGTTCAA GAACGGGCTG
ATCATCGAGA CATCCGGCCA TTCAGGCCAG GTGATCAAGT GCCTTTGCCC GTTGACCATT
ACCGACGAAG ACCTCGTCGG CGGCCTGGAC ATCCTCGAGC AGAGCGTCAA GGAAGTCTTC
GGTCAAGCCT AA
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| Protein sequence | MQTQILERME SEVRTYSRSF PTVFTEAKGA RLHAEDGNQY IDFLAGAGTL NYGHNHPKLK
QALADYIASD GIVHGLDMWS AAKRDYLETL EEVILKPRGL DYKVHLPGPT GTNAVEAAIR
LARNAKGRHN IVTFTNGFHG VTMGALATTG NRKFREATGG IPTQGASFMP FDGYMGEGVD
TLSYFEKLLG DNSGGLDVPA AVIIETVQGE GGINPAGIPW LQRLEKICRD HDMLLIVDDI
QAGCGRTGKF FSFEHAGITP DIVTNSKSLS GFGLPFAHVL MRPELDIWKP GQYNGTFRGF
NLAFVTAAAA MRHFWSDDTF ERDVQRKGRV VEDRFQKLAS FMTEKGHPAS ERGRGLMRGL
DVGDGDMADK ITAQAFKNGL IIETSGHSGQ VIKCLCPLTI TDEDLVGGLD ILEQSVKEVF
GQA
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