| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1872 |
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| Symbol | |
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| ID | 4028235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 2129035 |
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| End bp | 2130084 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637967066 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_573923 |
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| Protein GI | 92113995 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00059192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCTT TTTTGATCAA GCGACTGATG CATGCCCTCG TGGTCATGTT CGTCATCAGC
GTCATCAGTT TCGCCATCCA GAGCAATCTG GGCGATCCCA TCCAGCAGAT GGTGGGACAG
TCCGTGCCGG AAAGCGAGCG CGCCGAACTA CGCGAGGAAT TGGGCCTGAA CGATCCCTTC
CTCGTGCAAT ACGCCCGCTT CGCGGTGAAT GCCATGCAAG GCGACTTCGG CTACTCGTAT
TTCTTCAACG AACCCACGAC GGACGTCATC CTGCGCCACT TGCCGGCGAC ACTGGAGCTG
GTCATTGCCA CGACTCTGAT CATCGTGCTG CTCTCGGTGC CGATTGGCGT CTACTGCGCG
ATACGACCGC GATCGGCCCT GTCGCGATTG TTCATGAGCG TCTCCATCGT CGGTATCTCG
ATTCCCGTCT TTTTGACCGC CATCATGTTG ATCCAGATCT TCGCGATCGG GGTGGACTTT
TCGCCATTCC CGGCGGACAC GGGATGGGGA CAGTGGATCA ACGGGGCTCT GTCCACCGAG
GGCGGCATGC CGTCTTACGG GCGCGGCAAT GATCTGACGC ATCTCTTCGG CACCTGGGAC
AGCAATTTCT TCTCCCTAGA GGGACTGACG TACCTGGTAC TGCCTTCCCT CTCGCTGGCC
TCGATCATGC TGCCGCTCTT CATTCGGCTG ATACGCGCCG AAATGCTCGA GGTGCTGCAG
TCGGAGTACG TCAAGTTCGC CACGGCCAAG GGGATTTCCC GCAAGCGGAT CTATTTCGTC
CATGCGCTCA AGAACACCAT GCTGCCGGTG ATCACCGTCG GCGGTGTCCA GCTCGGGACC
ATGGTGGCCT ACACCATCCT CACCGAGACC GTTTTCCAAT GGCCGGGCAT GGGCCTGATG
TTCCTCGAGG CCATTCAGCG CTCCGACATT CCGCTCATCG TGACGTATCT GATGATCGTC
GGCCTGATCT TCGTGATCAC CAACACGCTG GTCGACCTGA TCTACGGGCT CGTCAATCCG
ACCGTGAAAC TGACAGGGAA GCCGGCATGA
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| Protein sequence | MIAFLIKRLM HALVVMFVIS VISFAIQSNL GDPIQQMVGQ SVPESERAEL REELGLNDPF
LVQYARFAVN AMQGDFGYSY FFNEPTTDVI LRHLPATLEL VIATTLIIVL LSVPIGVYCA
IRPRSALSRL FMSVSIVGIS IPVFLTAIML IQIFAIGVDF SPFPADTGWG QWINGALSTE
GGMPSYGRGN DLTHLFGTWD SNFFSLEGLT YLVLPSLSLA SIMLPLFIRL IRAEMLEVLQ
SEYVKFATAK GISRKRIYFV HALKNTMLPV ITVGGVQLGT MVAYTILTET VFQWPGMGLM
FLEAIQRSDI PLIVTYLMIV GLIFVITNTL VDLIYGLVNP TVKLTGKPA
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