Gene Csal_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1854 
Symbol 
ID4028374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2109021 
End bp2109554 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content62% 
IMG OID637967048 
ProductOmpA/MotB 
Protein accessionYP_573905 
Protein GI92113977 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTCA AACCCTATGC CAAAGGATTC GCCGTCGCCC TGTCGTTGGC GGTTCTCGCC 
GGGTGCTCCA GCACAGGCGG CACTCAGGAC GGCAGCATGG ATGGCACCTC AGGGACTGGT
GCCGGTGGTA CAGGCACGGC GTCCAGCCAA GGAATGGGCG ACGGGCAGGG CACCTCGGGC
ACGTCGATGA GCGATCGTGA CGCCATCCCC GAACAGCGCA CCATTTATTT CGCCTTCGAC
CGTGACACCA TTCGTCCCGA GTTCGAATCG GTGCTGAGCG CGCATGCCGA GTACCTGCAG
AGCCATCCCA ACACGAATGT CGTGCTGGAA GGCCATGCCG ACGAACGCGG TACGCGTGAA
TACAACCTGG GCCTGGGCGA GCGTCGCGCG CGCGCCGTCG AGCAGTATCT CACCGTGGAA
GGCGTCTCTG CGTCCCAGAT CGAGATCGTC AGCTATGGCG AAGAGCGTCC TGCGGTACGC
GGACACGATG AAGAGTCCTA TGCTCAGAAT CGTCGCGTCG TCTTCGCTTA TTAA
 
Protein sequence
MQFKPYAKGF AVALSLAVLA GCSSTGGTQD GSMDGTSGTG AGGTGTASSQ GMGDGQGTSG 
TSMSDRDAIP EQRTIYFAFD RDTIRPEFES VLSAHAEYLQ SHPNTNVVLE GHADERGTRE
YNLGLGERRA RAVEQYLTVE GVSASQIEIV SYGEERPAVR GHDEESYAQN RRVVFAY