Gene Csal_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1827 
Symbol 
ID4029101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2076187 
End bp2077458 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content63% 
IMG OID637967016 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_573878 
Protein GI92113950 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000139866 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCAGC CCTTGCCCCT TTCCACCCCC AATCGCAACC TCGTGCGGCT GACGATCGTT 
CGCGGCATCA CGTGGACCGG TTTCCTGGGG GCGATCATCT TCGGTATCGA AGTACTGGGG
TTCCAACTGC ACGTCATGCC GGTCATTTCC GTCATCATCG CCATGGGGCT GGTCAACGTG
GCGACCTGGT GGCGCCTGGG GCGGCCTCGC GCGGTGACCG ATACCGAGTA TCTGACCCAT
CTGCTGATCG ATGTGGCAGG GTTGAGCATG CTGTTCTACT ACACCGGCGG CTCGACGAAC
CCCTTCATCA CCTATTATCT CGTGCCGGTC ACGATCGCCG CCGCCACGCT GCCATGGCGC
TACGCCTGGG TCATCGCCGG CGCCTCGCTG GCCAGTTATA CCGCCATGAT GCTGTTTTAC
GAACCCGTCC CCCAGCTCAG CAATGGCTTC GTGGGCACCG GCATCCGCCT GCATATCGTC
GGCATGTGGA TCAACTTCGG ACTCTCCGCC GGACTGGTCA CCTTCTTCAT CTTCAAGATG
GCGCATGCCC TGCGGCGTCG CGACCTCACC TTGTCCCGCA CTCGCGAAAC CGCCCTGCGC
AACGAGCAGG TGCTGGCCGT CGCCACCCAG GCGGCCGGCA CCGCGCACGA GCTGGGAACG
CCGCTGTCCA CCATGGCGGT ACTGCTCAGC GAAATGCGTC AGGAAGCGCA AGACAACCCG
CTGCTCGTCG AGGACATCGA CCTGCTGCGT CAGCAGGTCG ATACCTGCAA GGCGCGACTG
CAGACCCTGG TCGCCAATGC CGACCGGCGG CGCCTGGCCA AGCCCGAGAT CGTCGCCGCC
GAGACCTGGC TTCGCGATGT CTTGCAGCGC TGGCTGGTGT TGCGTCCCGA CGTGAGCCAT
CACATCGAGA TCCCCGGCAA GCGCGGCACC CCGTTGATCG CAACCGATAC GACGCTCGAG
CAGGCCATCA TGAATCTGCT CAACAATGCC GCCGACGCCA ATCCGAGGGA TATCGCCATC
ACGCTGGACT GGACGCAGGA CGACATCATC ATCGATATCC GCGACCATGG TCCTGGCGTC
TCCATGAACA TCGCCGACCA GCTGGGCGAA ACGTTCATTT CGACCAAGAG CAAGGGCATG
GGGATCGGCC TGTTCCTGAC CCATGCCACG ATCAACCGCT TTGGAGGCGG CGTGAGCCTC
TATAATCATG AAGAAGGCGG CACGCTGACC GAGGTCAAGT TGCCGCGAGC GTCGGCTGGC
GCCCCCGCCT GA
 
Protein sequence
MHQPLPLSTP NRNLVRLTIV RGITWTGFLG AIIFGIEVLG FQLHVMPVIS VIIAMGLVNV 
ATWWRLGRPR AVTDTEYLTH LLIDVAGLSM LFYYTGGSTN PFITYYLVPV TIAAATLPWR
YAWVIAGASL ASYTAMMLFY EPVPQLSNGF VGTGIRLHIV GMWINFGLSA GLVTFFIFKM
AHALRRRDLT LSRTRETALR NEQVLAVATQ AAGTAHELGT PLSTMAVLLS EMRQEAQDNP
LLVEDIDLLR QQVDTCKARL QTLVANADRR RLAKPEIVAA ETWLRDVLQR WLVLRPDVSH
HIEIPGKRGT PLIATDTTLE QAIMNLLNNA ADANPRDIAI TLDWTQDDII IDIRDHGPGV
SMNIADQLGE TFISTKSKGM GIGLFLTHAT INRFGGGVSL YNHEEGGTLT EVKLPRASAG
APA