Gene Csal_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1800 
Symbol 
ID4028600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2048079 
End bp2048570 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content56% 
IMG OID637966989 
Producttranslation initiation factor 3 
Protein accessionYP_573851 
Protein GI92113923 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00939294 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACC GTATTCGTGT GGACGAAGTC CGCCTCATCG ACAGCAGCGG CGAGCAGGTT 
GGTGTCGTCT CGACTCAGGA CGCGCTGGAG CGTGCCGAGG CCGAGGGCTT GGATCTCGTC
CAGATCTCCA ACGCTGACCC CATCGTCTGC AAGATCATGG ACTATGGGAA GTTTCTTTTC
GAGCAGAAGA AACAGCGTTC TGCTCAGAAG AAAAAGACGA AGCAGATTCA GGTCAAGGAA
GTCAAATTCC GACCTGGTAC CGACGAGGGC GACTATCAGG TGAAATTGAA AAACCTGACG
CGTTTCCTCG AAGGGGGCGA CAAAGGCAAG GTCACGCTGC GTTTTCGGGG ACGTGAGATG
GCGCACCAGG ACATCGGCCG CAAGCTGATG GAACGGATCG CCGCCGACCT CGAGGACATG
GCGACTGTCG AATCCTTCCC CAAGATGGAA GGTCGTCAGA TGATCATGAT CCTGGCGCCC
AAAAAGAAGT GA
 
Protein sequence
MNDRIRVDEV RLIDSSGEQV GVVSTQDALE RAEAEGLDLV QISNADPIVC KIMDYGKFLF 
EQKKQRSAQK KKTKQIQVKE VKFRPGTDEG DYQVKLKNLT RFLEGGDKGK VTLRFRGREM
AHQDIGRKLM ERIAADLEDM ATVESFPKME GRQMIMILAP KKK