Gene Csal_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1762 
Symbol 
ID4028289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2007463 
End bp2008494 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content66% 
IMG OID637966950 
Producthypothetical protein 
Protein accessionYP_573813 
Protein GI92113885 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTAC CGCCCATCAT CGGAGAATGT CTCATGTGGC AGGGATTGAT ACTCTGCGCC 
GGCCTGACCC TGGGGGGCTT CACCCTGGCT CACCTGCCCG GCATCCGCGA AAGCGGCATC
AGTCCACTGG TCTTCTCGCT GCTGCTGGGT CTCGTGATCG GCAACCTGCC CGTCAGCGGG
CGCCTGCCTC AGGCAGGCCG CGGGCTACAG TTCGCGACCC GCTGGCTGCT GCGCGGCGGC
ATCGTGCTGT TCGGCCTGTC GCTGACGTTA CAGCAGATTC TCGGCCTCGG CCCCAAGGTC
ATCATGCTCG ATGCCCTGGT GATCTGCACC ATCCTGACCG CTGGGTACTG GATCGGCACA
CGTCTGCTGG GGCTCGATCG CGAAACCGCT CTGCTCACGA GCGCCGGTAG TGCCATCTGC
GGCGCCGCCG CCGTGCTCGC CACCGAGACC ACCATCCGTT CGAAGCCGGC CGCCACCTCG
ATGGCCGTGG CCACCGTCGT GCTGTTCGGC TCGCTGGCGA TGCTGGTATA TCCCCTGCTC
TATCCTCTCA CCGGCATGGA CGAGGGATTG TTCGGCATCT ACATCGGCGC CACCGTGCAT
GAGGTGGCCC AGGTGGTCGC CGCCGGCGAC GCGGTCGGTC CCCAGGCGTT GGCCAATGCG
GTGATCGTCA AGCTCGTCCG GGTGATGCTG CTCGTGCCCT TTCTGCTGGT GGTCGGCCAG
TGGTGGCTCC GTCATCGGCA GGCGGAAGAC GACTCGGAAG TCGGCCGCGG CGGTCTGGTG
ATTCCCTGGT TCGCCTTCGG CTTTCTGGCC ATGGTGATCT TCAACAGCAT CGTCGTCCTG
CCGGCAGCCC TGCACCAGTC GCTGGTAATG GGCGGGCAGA TCGCGCTGGC CATGGCGATG
GCGGCACTGG GTTTCGAGAC CCGCCTGGAA AAGCTCAAGG CGCTGGGCGT CAGGCCCATG
CTGCTGGCCC TGATCCTGTT CCTGCTGCTG CTGATCGGCG GTGGCTGGGT GACGCCCTGG
CTCATGCACT GA
 
Protein sequence
MAVPPIIGEC LMWQGLILCA GLTLGGFTLA HLPGIRESGI SPLVFSLLLG LVIGNLPVSG 
RLPQAGRGLQ FATRWLLRGG IVLFGLSLTL QQILGLGPKV IMLDALVICT ILTAGYWIGT
RLLGLDRETA LLTSAGSAIC GAAAVLATET TIRSKPAATS MAVATVVLFG SLAMLVYPLL
YPLTGMDEGL FGIYIGATVH EVAQVVAAGD AVGPQALANA VIVKLVRVML LVPFLLVVGQ
WWLRHRQAED DSEVGRGGLV IPWFAFGFLA MVIFNSIVVL PAALHQSLVM GGQIALAMAM
AALGFETRLE KLKALGVRPM LLALILFLLL LIGGGWVTPW LMH