Gene Csal_1732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1732 
Symbol 
ID4028947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1975267 
End bp1975734 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content61% 
IMG OID637966920 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_573783 
Protein GI92113855 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00171017 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCG TATTCCATTG GATCGACCGC ATCATGCGTC TCGATGAAGT GTTGGCCAGC 
GCGGCGCTCT TCGCGATCTT TCTCGTCGCC ATCGGCAACA TCTTCATGCG CTATCTCTTC
GACACGCCGC TGGCCTGGAC CGAGGAGGTC CTGCAACTGC TCATGGTATG GGCCACCTTC
CTCGGCGCCA GCGCCCTGGT ACGGCGCAAC GAGCACGTGC TCATCGGCAT GCTGTCGGAA
AACCTGCCGG CGTCGTTCGC CCGCTGGAAC GACCGCCTCT TCAATGTCGG CATGGTGCTG
ATCGCCGCCA TCGTGCTCGG CTACTGGGGC CTGCAGCTGC TGCCCTATTC CAATTTCCGC
AGCACGCCCA TGCTGCAGAT CCCGTACATG TGGATTCACG TCGCCATTCC GGTCAGTGCC
GTCGTCATGG CCTACCACTG CCTCGTCCGA CTGGCTCGCG ATACCTAA
 
Protein sequence
MKRVFHWIDR IMRLDEVLAS AALFAIFLVA IGNIFMRYLF DTPLAWTEEV LQLLMVWATF 
LGASALVRRN EHVLIGMLSE NLPASFARWN DRLFNVGMVL IAAIVLGYWG LQLLPYSNFR
STPMLQIPYM WIHVAIPVSA VVMAYHCLVR LARDT