| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1658 |
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| Symbol | |
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| ID | 4029120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1886332 |
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| End bp | 1887783 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637966847 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_573710 |
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| Protein GI | 92113782 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGA CCGCAACCTC GACCGTTGGG CGACGTCCGG TGTCTGGGGG CCCAGTACCT
GGTAGACAAG CCCCAGGTAG ACAAGCCCCT GGTAGACGAG TACCCGGAAG GCCGCTACCT
GGGAGCCTGG TACGCAGCCT GCTGAGCCTC GTATTGCTGC TGTTCGCGGT GCCCGGGCTC
GCCCAGCAGG GCGAGAGCAC GCTGCGTCTG GACATCGGCG ACCAGCAACG GCTCGTCTTC
GAGCGGCCGG TATCACGTAC CGCGCTGGGC GACGGCGACA TCGCCAGCGC GCAGATGGTG
GACGCCCGCC AACTGCTGCT CACCGGTCTC GCGGCGGGCA CCACCTCGCT GAGCGTCTGG
CGGGACGGCC GCGATGCACC GCAGCGCTAC CGTGTCTCGG TACGCCCGCG CGGCGCACGG
GGCATGGAGT CCGAATACAC CCTGGCCGAC GGCACCGACA CCCCGACCCT CGCGGGGGAG
AGTGAGTCCC TGGCGCGTCA CGCCCAGGCA CGCTCGCGCC TCGGCGATCA GAACACCGTG
GACGCCACCC GCCAGACGGG CCCGGTGCAG GTGCAGACCG ACATCCGCGT GGTCGAGGTC
AACCGCAGCA AGCTGCAGTC CGCCGGCTTC TTCTTCGGCA AGAACAACGG CGGCAACACT
CTGATCGGGG TCGGCACCAG CGGCGCCCTG GGCGGTGCCG AAGCCGTGGG CGACAGCTTC
AGCGAGGGCT TTTCCTTTCT CACCGGCTCC GGCTTCCAGA CCGGCAACGG CGGCTACAAC
ATCGTCGTCG GCAACGCCAA CGACAGCGTG CTGGGCGTGA TCAGCGCGCT GCGCAGCAAC
GGTTTCGCCT ACACCCTGGC CGAACCCAGC CTGGTCACGC TCTCCGGGCA GAGCGCCTCC
TTCCTGGCCG GGGGCGAGTT CCCGTTCCCC GTGAGCAACG ACGACGGCGA CGTGCGCATC
GACTTCAAGG AATTCGGCGT GCGCCTGCAG CTCACGCCCA CCGTGCTAGA CAGCAACAGC
ATCATGCTCA AGGTCGCCCC CGAAGTCAGC GAGCTCGACT TCACCCAGGG CGTGGAGGCC
AGCGGCGTGG CCGTGCCCGC CCTCAACGTG CGGCGCACCG ACACCAGCGT CCAGCTCGGC
GACGGCGAAA GCCTGATCAT CAGCGGCCTG GTCAGCAACA GCACCATGCA GACCGTGGAC
AAGTTCCCCG GCCTGGGCGA TCTGCCGGTC ATCGGCGCGT TCTTTCGCTC CACGCGCTTC
GAGACCCAGA ACAAGGAACT GGTGATGATC GTCACGCCGC ATCTGGTGGC GCCGATGGCG
GCGGGCGCCC CCCGGCCGGA ACTGCCCGGC GAGGCCCTGC GGCGCTACGA CCCCTCGTAT
CTGGAACTGC TGTTCGACCC CCAGGACGCC GAAAGCCTCG AGCGCCTGGG CAACGTCGGT
TTCAGCAACT AG
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| Protein sequence | MSETATSTVG RRPVSGGPVP GRQAPGRQAP GRRVPGRPLP GSLVRSLLSL VLLLFAVPGL
AQQGESTLRL DIGDQQRLVF ERPVSRTALG DGDIASAQMV DARQLLLTGL AAGTTSLSVW
RDGRDAPQRY RVSVRPRGAR GMESEYTLAD GTDTPTLAGE SESLARHAQA RSRLGDQNTV
DATRQTGPVQ VQTDIRVVEV NRSKLQSAGF FFGKNNGGNT LIGVGTSGAL GGAEAVGDSF
SEGFSFLTGS GFQTGNGGYN IVVGNANDSV LGVISALRSN GFAYTLAEPS LVTLSGQSAS
FLAGGEFPFP VSNDDGDVRI DFKEFGVRLQ LTPTVLDSNS IMLKVAPEVS ELDFTQGVEA
SGVAVPALNV RRTDTSVQLG DGESLIISGL VSNSTMQTVD KFPGLGDLPV IGAFFRSTRF
ETQNKELVMI VTPHLVAPMA AGAPRPELPG EALRRYDPSY LELLFDPQDA ESLERLGNVG
FSN
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