Gene Csal_1631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1631 
Symbolrnc 
ID4025899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp1853909 
End bp1854589 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content64% 
IMG OID637966820 
Productribonuclease III 
Protein accessionYP_573683 
Protein GI92113755 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00732498 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAGCCC TCAGTCGACG GATCGGTTAC CAGTTTCGCG ATACCTCGCG ACTGGAATTG 
GCGCTGACCC ACCGTAGCTA CGGGGGCAAG AACAATGAGC GTCTGGAGTT TCTAGGTGAC 
TCGATCGTCA ATTTCGTGAT CGGCGAGGCG TTGTTTCAAC GCTTTCCCCA GGCCCGCGAG 
GGTCAGTTGT CGCGCCTGCG CGCGCGCCTG GTCAAGGGAC AGACCCTGGC CGAGCTGGCG 
CGCGAGTTCG AACTGGGCGA GTGCCTGCGC CTGGGGTCCG GCGAGATGAA GAGCGGCGGA 
TACCGCCGCG ATTCCATCCT CGCCGATGGC GTGGAAGCGC TGATCGGCGC CATCTATCTC 
GATGCCGGGA TGGACGTCGC CAAGGCCCGT GTCCTCTCCT GGTATGCCAC CCGCCTGGAG 
GCGATCGACC TGCAGGACAA CCAGAAGGAT CCCAAGACGC GCCTGCAGGA ATTCCTGCAG 
TCGCGCCAGG CGGCGCTGCC CCGTTACGAG GTCGTGTCGG TCGAGGGCGA GGCGCACGCG 
CAAGTCTTTA CCATCGAGTG TCACGTCGAG ATGCTCGAGG ATCATACGCT GGGTGTCGGC 
TCCAGCCGCC GTCACGCCGA GCAGCAGGCC GCCGAAAAGG CGCTTGAAAC TCTCGAACCT 
TCCCGGGGCA AGCACGCATG A
 
Protein sequence
MQALSRRIGY QFRDTSRLEL ALTHRSYGGK NNERLEFLGD SIVNFVIGEA LFQRFPQARE 
GQLSRLRARL VKGQTLAELA REFELGECLR LGSGEMKSGG YRRDSILADG VEALIGAIYL 
DAGMDVAKAR VLSWYATRLE AIDLQDNQKD PKTRLQEFLQ SRQAALPRYE VVSVEGEAHA 
QVFTIECHVE MLEDHTLGVG SSRRHAEQQA AEKALETLEP SRGKHA