| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1586 |
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| Symbol | |
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| ID | 4027605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1806246 |
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| End bp | 1807985 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637966775 |
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| Product | Lipid A export ATP-binding/permease protein MsbA |
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| Protein accession | YP_573638 |
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| Protein GI | 92113710 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0765157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAAACG CTACCAGTTG GTCCCTTTAC CGTCGCTTGC TGAGTTACGT CAGACCGTAT
TGGAAGGCAT TCCTGGCCGC CGTGGTGGGC TATGCCATCT ATGCGGCCTC GAGCACTGCG
CTCGCGGAGA TGATGAAGCG TCTGATCGAC GGCATTCAGA ATCCCGATGC GGCATTTCGT
CTCATGCTGC CCCTGTTCGT GATCGGCATG TTCGCGGCGC GTGGCGTGGG AACCTTCCTG
GGTACCTATT ACATGAGCGA CGTGGCCCGT AACGTGGTGC ATGCACTGCG CTGCGAGGTC
TTCAATCACA TGCTGCGCCT GCCGGGGCGT TTCTTCGACA TGCACTCGAG CGGTCATCTG
CTCTCGCGCG TCACCTACCA TGTCGAACAG GTCACCGGGG CGGCCACCAA CGCGATCACC
ATCATCCTGC GCGAAGGGCT GTTCGTGATC GGTCTGGTCA GTTATCTGCT GTGGACCAAC
TGGATGCTGA CGCTCATCTT CATGGCCGTC ACCCCGTTGA TCGGGCTGGT CGTCAATTAC
ACCAGCAAGC GTTTCCGCCG CTTGTCGCGG CGCATACAGA ATTCCATGGG CGATGTCACT
CATGTGGCGT CCGAGGCGCT GTCGGGGTAT CGCGTGGTGC GTACCCACGG TGCCGAAGCC
TACGAAAAGG CCCGCTTCGC CGAGGCCAGC GATTACAACC GCGAACAGAG CATGAAGGTG
GCCCTGACCA AGGCGGTGAG CACGCCGGTC ATTCAGCTGC TGGTGGCGCT TTCCCTGGCG
GGGCTGGTAT GGCTGGCGAT GTCGCCGGCA CTCATGGCGT CGATGACGCC GGGCGAGTTC
GTGGCCTTCA TCACCGCTGC CTCGTTGATG GCCAAGCCGG TACGCCAGCT GACCGAAGTC
AACAGCACGA TCCAGAAAGG GCTTTCCGCC TCCCAGGAAT TGTTCGGCCT GCTCGAACAG
CCGCCCGAGG TCGACGAAGG CAGCTACGTG CCGGCGCGCA TCGACGGTCG TGTCCGCTTC
GAGGGCGTGC GCTTTCGTTA CGGCGAGGAT CAGGCGGAAG TGCTCAAGGG CATCGACCTG
GACGTGCCTC AGGGCGAGAT GATTGCCATC GTGGGGCGTT CCGGCAGCGG CAAGTCGACG
CTGGTCAGCC TGATGCCGCG CTTCTATCGG CCCACCGAAG GCCGGGTGCT GCTGGATGAC
GTGGATATCC AGGAATACGC GCTGTCACCG CTGCGTCAGC GTATCGCCCT GGTGTCCCAG
CAAGTCACGC TGTTCAATAC CACCATCGCC GCCAATATCG CCTACGGCCA TCCCGACGCC
GATCGCGAGG CGGTCGAGAG CGCGGCACGT TCCGCCTACG CGCACGAGTT CATCGAGCGC
TTGCCCAACG GTTACGATAC CGTCGTCGGC GACAACGGCG TTATGCTGTC CGGTGGCCAG
CGGCAGCGCC TGGCCATCGC GCGGGCCATC TTCAAGGATG CGCCGCTGCT GGTGCTCGAC
GAAGCGACGT CGGCGCTGGA TACCGAGTCC GAGCGCTATA TCCAGCAGGC GCTGGAACGG
GTGTGCCGGG GACGCACGAC CTTCGTCATC GCGCATCGCC TGTCGACCAT CGAACGTGCC
GATCGCATCC TGGTCATGGA GCAGGGCGAA ATCATCGAGA GCGGCACGCA TGGCGAACTG
TTGGCCCAAG ACGGTGCCTA TGCGGCGCTT CATCAACTGC AATTCCAGGA GGCCGAGTGA
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| Protein sequence | MRNATSWSLY RRLLSYVRPY WKAFLAAVVG YAIYAASSTA LAEMMKRLID GIQNPDAAFR
LMLPLFVIGM FAARGVGTFL GTYYMSDVAR NVVHALRCEV FNHMLRLPGR FFDMHSSGHL
LSRVTYHVEQ VTGAATNAIT IILREGLFVI GLVSYLLWTN WMLTLIFMAV TPLIGLVVNY
TSKRFRRLSR RIQNSMGDVT HVASEALSGY RVVRTHGAEA YEKARFAEAS DYNREQSMKV
ALTKAVSTPV IQLLVALSLA GLVWLAMSPA LMASMTPGEF VAFITAASLM AKPVRQLTEV
NSTIQKGLSA SQELFGLLEQ PPEVDEGSYV PARIDGRVRF EGVRFRYGED QAEVLKGIDL
DVPQGEMIAI VGRSGSGKST LVSLMPRFYR PTEGRVLLDD VDIQEYALSP LRQRIALVSQ
QVTLFNTTIA ANIAYGHPDA DREAVESAAR SAYAHEFIER LPNGYDTVVG DNGVMLSGGQ
RQRLAIARAI FKDAPLLVLD EATSALDTES ERYIQQALER VCRGRTTFVI AHRLSTIERA
DRILVMEQGE IIESGTHGEL LAQDGAYAAL HQLQFQEAE
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