Gene Csal_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1549 
Symbol 
ID4027647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1761908 
End bp1762987 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content63% 
IMG OID637966738 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_573601 
Protein GI92113673 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACCGT CCGCGCCGGA GCTGGCGGCG TCGGCATGGG TATTGATGGA CGCCGATAGC 
GGCAAGATCC TGGTCGAGCA CAATGCCGAC AAGGAACTGC CGCCGGCCAG TCTCACCAAG
ATGATGACGG CCTATATCGT CGAGCGCGAA ATCGATGCCG GCAACATCAG TGGCGACGAC
GAGGCCACGA TCAGCGAAAA CGCCTGGCGG ACCGGCGGCT CGCGGATGTT TCTCAATCCG
GGCAGCAAGG TGAGCATCGA CAATCTGCTC CGGGGCGTGG TGATCCAGTC GGGTAACGAT
GCCAGCGTGG CGCTGGCCGA GCATATCGCG GGCAGCGAGG ACGCCTTTGC CGATCTCATG
AATCAGCAGG CGGCGCGGAT GAAGCTCGAG CACACGCATT TCATGAACCC CACCGGGCTG
CCCCACGAGG AACACTACTC CTCGGCGCAC GATCTGGCGG TCATCGCTCA GCACATCATC
AAGGACTACC CCGACCATTA CGAGGTCTAT TCCGAAAAGT ACTTCACCTG GAACGACATT
CGCCAGCCGA ACCGCAACCG CCTGCTATGG CGCGACCCGA ACGTCGATGG CTTGAAGACG
GGGCACACCG AGGCCGCCGG CTATTGCCTG GTCGCGTCCG CCAAGAAGGA CGGTACGCGC
CTGGTGGCCG TGGTCATGGG AACCGACTCC GATGAAGCGC GGGCCCAGGA AACCCAGAAG
CTGCTGAGCT ACGGGTTCCG CTTCTTCGAG ACGCAACGTC TCTACGAAAG CGGCGCCGTG
CTCAATACGC CCCGCATCTG GGGAGGCGAG AAGGACGAAT TGCGTCTGGG CGTCGCCGAC
GATGTCTACT TGACCGTGCC CCGTGGGCGC AGCGACGAGC TGAGCGCTCA GCTCGACATT
CGCGAAACCA TCGAGGCGCC GGTGAGCGCG GGCGATCGCC TGGGAACCTT GAAGATCGTG
CTGGACGGCG AGGTGCTCGA CGAGCGGCCG CTGGTGGCAC TGGAGTCGAT CGACGAGGGC
GGCTTCTTCA AGCGGATCTG GGATAGCGTG CTGCAGTTCG TGAACGGCTT CTTTGACTGA
 
Protein sequence
MVPSAPELAA SAWVLMDADS GKILVEHNAD KELPPASLTK MMTAYIVERE IDAGNISGDD 
EATISENAWR TGGSRMFLNP GSKVSIDNLL RGVVIQSGND ASVALAEHIA GSEDAFADLM
NQQAARMKLE HTHFMNPTGL PHEEHYSSAH DLAVIAQHII KDYPDHYEVY SEKYFTWNDI
RQPNRNRLLW RDPNVDGLKT GHTEAAGYCL VASAKKDGTR LVAVVMGTDS DEARAQETQK
LLSYGFRFFE TQRLYESGAV LNTPRIWGGE KDELRLGVAD DVYLTVPRGR SDELSAQLDI
RETIEAPVSA GDRLGTLKIV LDGEVLDERP LVALESIDEG GFFKRIWDSV LQFVNGFFD