Gene Csal_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1547 
Symbol 
ID4027645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1759857 
End bp1760891 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content67% 
IMG OID637966736 
Productlytic murein transglycosylase B 
Protein accessionYP_573599 
Protein GI92113671 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02282] lytic murein transglycosylase B 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGGA ACATGACACG CGCCCAGCGA AAAAAATTCG GCCCGCTACT GGCGGCGATG 
TTCCTGGGGC TGTGCGGAGG CGCGGCGCAG GCGGCACCGG ATTTCGATCC CGCCTCGCAT
GAGAACATTC GTCAATGGCT CGATGGGGTG GCCCGGCAAG GCCTGGCACG CGACGAGGTG
ACGCGGGCGC TGCAGCATGC ACGCTTCCGG CAGAACGTGC TGGATGCCAT GCAGGGAGCC
GCGGAGCGTC GGCTGAGCTG GCACGAGTAC CGCGATATCT TCGTGCAGCC CAGGCGCGTT
CAGGAAGGGG TGGCATTCAT CGAGGCGCAT CGCGAGGCGT TTGCGCGCGC CGAGCGCGAA
TTCGGCGTCC CGCCGGCCTA CATCGCCGCC ATCATCGGCG TCGAGACGCG CTATGGGCAG
CACAAGGGCG ACCACCGCGT GCTCGACTCC CTGGCCACCC TGGCGTTCCA TCATCCCTCG
CGTGGCGACT TCTTCCAGGG CGAGCTCGCG GCCTTTCTCG AGATCACGCT CGAGCAGGAC
ATCTCGCCGC AAATGCCCAA GGGATCCTAT GCCGGGGCCA TGGGCTATCC GCAGTTCATT
CCCACGAGCT ACCAGGCCTA TGCGGTCGAT TTCGACGGCG ACGGTCGCCG CGATCTCTGG
GAAGACCCCG TGGATGCGAT CGGCAGCGTG GGCAATTATT TCGCCGAACA TGGCTGGCGG
CGCGACGCCC CCGTGGTGAC GCCGGCCGAG GGACCGGCGA CGCCCCCCGA CGGCATTGAC
TTCAACGCCA CCCGGGCGCC TTATCTCGAG GCGGCGCGGC TGGCCTCGGC CGGCATCGTG
CCGCGCGACG GCGCATCGGT GGACGGGAGC GTGGTGCCCC TGTCGCTGGA GCTGGCCGAT
GGCCGCTACC GGTATGCCCT GGGGCATCGC AATTTCTACG TCATCACGCG TTACAACCAC
AGCCATCTGT ACGCCATGGC GGTACACGAT CTCGCCGAGC GCATCCAGGC GGCGCTCGAC
GGAGACCCGG CATGA
 
Protein sequence
MKRNMTRAQR KKFGPLLAAM FLGLCGGAAQ AAPDFDPASH ENIRQWLDGV ARQGLARDEV 
TRALQHARFR QNVLDAMQGA AERRLSWHEY RDIFVQPRRV QEGVAFIEAH REAFARAERE
FGVPPAYIAA IIGVETRYGQ HKGDHRVLDS LATLAFHHPS RGDFFQGELA AFLEITLEQD
ISPQMPKGSY AGAMGYPQFI PTSYQAYAVD FDGDGRRDLW EDPVDAIGSV GNYFAEHGWR
RDAPVVTPAE GPATPPDGID FNATRAPYLE AARLASAGIV PRDGASVDGS VVPLSLELAD
GRYRYALGHR NFYVITRYNH SHLYAMAVHD LAERIQAALD GDPA