Gene Csal_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1546 
Symbol 
ID4027644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1758653 
End bp1759798 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content63% 
IMG OID637966735 
Productrod shape-determining protein RodA 
Protein accessionYP_573598 
Protein GI92113670 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.317218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGGGAC TTGAGTGGCG TCGATTCAGT CCGGCATCGT CCGATGGCAT GGGGCGCAAG 
CGTTCGTTGT GGTCGCGCCT GCATCTCGAC CCCTGGCTGC TGCTGCTGCT GCTGACCTTG
ATGGGGGCGG GACTGGTCGT CCTGTACAGC GCCAGCGGCA TGAGTCCGGC GGTCACCATG
GGACAGGGCA TGCGCTTCGG GGTTGCCTTG CTGGCCATGT TCATGGTCGC CCAGTTTTCG
CCGGGCACCC TGTACCGCTG GACGCCGTTG GCCTATTGCA CGGGCGTGGC GATGCTGCTG
GCGGTGGAGA TCATGGGCGA TATCGGCATG GGGGCGCAGC GTTGGCTGGA AATCCCCGGC
GTGATCCGCT TTCAGCCGTC GGAATTGATG AAGCTGGCGG TCCCCATGAT GGTCGCGGCT
TATCTCTGCA AGCGCCCGCT GCCGCCCAAT ACCCGCGATT TGCTGGTGTG CGGCTTCATC
ATCGGCTTCC CGGTGATGCT GATCATGCGT CAGCCCGACC TGGGAACGTC GCTGCTGGTG
GCGTGTGCCG CGGTCTTCGT CATTTTCCTC GCCGGGCTGT CGTGGCGAGT GATCGCCTTG
CTGGGGGCAC TGGCGGCGTC GGCCTTGCCG CTTTTGTGGT TCAACATGCA TGAATATCAG
CGCCAGCGCG TGCTGACGTT CCTGAATCCG GAAAGCGATC CGCTGGGCGC GGGCTGGAAC
ATCATCCAGT CGAAGACCGC CATTGGCAGT GGCGGGGTCT TCGGCAAGGG ATGGGGACTG
GGGACACAGT CCCAGCTGGA GTTCCTGCCC GAACGTCACA CCGACTTCAT CGTCGCCGTG
CTCGGGGAAG AGTGGGGGCT GATCGGCATG CTGGTCTTCC TGGCGCTCTA TGTCCTGATC
GTGGGGCGCG GACTGTTTCT CGCCAATACC GCGCAGAACA CCTATGGACG CCTGGTGGGG
GGCAGCATCG TGCTGACGTT TTTCATCTAC GTCTTCGTCA ATATCGGCAT GGTCAGCGGC
ATTCTGCCCG TCGTCGGAGT GCCGTTGCCG CTGGTCAGTT TCGGGGGGAC GTCCAGCGTG
ACCTTGCTGA TCGGTTTCGG TATCCTCATG TCCGTTCACA GCCACCGGCG GTTGCTGCCG
CGCTAG
 
Protein sequence
MKGLEWRRFS PASSDGMGRK RSLWSRLHLD PWLLLLLLTL MGAGLVVLYS ASGMSPAVTM 
GQGMRFGVAL LAMFMVAQFS PGTLYRWTPL AYCTGVAMLL AVEIMGDIGM GAQRWLEIPG
VIRFQPSELM KLAVPMMVAA YLCKRPLPPN TRDLLVCGFI IGFPVMLIMR QPDLGTSLLV
ACAAVFVIFL AGLSWRVIAL LGALAASALP LLWFNMHEYQ RQRVLTFLNP ESDPLGAGWN
IIQSKTAIGS GGVFGKGWGL GTQSQLEFLP ERHTDFIVAV LGEEWGLIGM LVFLALYVLI
VGRGLFLANT AQNTYGRLVG GSIVLTFFIY VFVNIGMVSG ILPVVGVPLP LVSFGGTSSV
TLLIGFGILM SVHSHRRLLP R