Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1544 |
Symbol | |
ID | 4027642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 1756234 |
End bp | 1756701 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637966733 |
Product | hypothetical protein |
Protein accession | YP_573596 |
Protein GI | 92113668 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00441553 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTCC GCGTTCTGGC CGTTGGAACG CGCATGCCCG ACTGGGTGAC ACGAGGCGTC GACGAGTATC TCAAGCGGCT GCCGCGGGAT TTCAGCGTCG AGATCGTCGA GATCGCGCCC GGCAAACGCG GCAAGAATGC CGACGTGGCG CGGGCGATTC AGGGCGAGGG CAATGCCATG CTGGCCAAGC TGCGCGATCA GGAGCGTGTC ATCGCGCTGG CCGTCGACGG ACAACACTGG AGTACCGAGC GCCTCGCCGC CAATGCCGAT CATTGGCGGC AGGACGGGCG CGATGTGGCA CTGCTGGTGG GCGGGCCGGA CGGGCTCGAC CCCCGCTTGC TGTCGCGCGT CGAACAGCGC TGGTCGCTAT CGGCACTGAC GCTGCCGCAT CCGCTGGTGC GCATTCTATT GGCCGAGCAG CTGTATCGTG CTTGGACCTT GCTGGCCGGG CACCCTTATC ACCGATGA
|
Protein sequence | MKLRVLAVGT RMPDWVTRGV DEYLKRLPRD FSVEIVEIAP GKRGKNADVA RAIQGEGNAM LAKLRDQERV IALAVDGQHW STERLAANAD HWRQDGRDVA LLVGGPDGLD PRLLSRVEQR WSLSALTLPH PLVRILLAEQ LYRAWTLLAG HPYHR
|
| |