Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1526 |
Symbol | lolB |
ID | 4029228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 1738145 |
End bp | 1738789 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637966715 |
Product | outer membrane lipoprotein LolB |
Protein accession | YP_573578 |
Protein GI | 92113650 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.191238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCACG TCTCGTCACC GCACCCTTGC GCCGCCATTG CCTCCGCCCG TGTCTGGCTG GGCCTCGTGC TCGTCGCCTT GCTGGCGGGC TGTGCCAGCC AGGCGCCCAG TCCCGATCAG TCGCGTGACC GCGGCGACTG GGAGGCGCAG ATCGAGCGCC TGCAGACACT CGACGCCTGG AGTCTCGCGG GCAAGGTCGG GCTTCGTACC AATGAAGGTT CCGAAAGCGC CAATATCGAC TGGCAACAGC GCCCGGACAC GTACCGCATC CTGATCAGCG GCCCCTTCGG CGCCGGCCGC ACCCTGCTCA CGGGGCGCCC CGGCGCGGTG ACGCTGACCA ATGGTGAAGG ACGTTTCGAG GCCGAGACAC CGGAAGCCCT CATGGAGCAG CAACTGGGCT GGTCGCTGCC CATCTCGGCG CTCGACTACT GGGTACGCGG CCTTCCCGCC CCCGAGGGCG GCGAGCGCAT CGAGCACGAT GAACAAGGCT TCCCGCAGCA GTTGCGTCAG TTCGGATGGA CGATCGAATA TCGAGACTGG ACACGCGCCG ACACGCTGTG GATGCCGCGC CGGCTGGTCA TGACCTACGG CGAGCTGCGC GCCACTCTGG TCGCCAACCA GTGGCAGCTG CTGAGCGATA CATGA
|
Protein sequence | MKHVSSPHPC AAIASARVWL GLVLVALLAG CASQAPSPDQ SRDRGDWEAQ IERLQTLDAW SLAGKVGLRT NEGSESANID WQQRPDTYRI LISGPFGAGR TLLTGRPGAV TLTNGEGRFE AETPEALMEQ QLGWSLPISA LDYWVRGLPA PEGGERIEHD EQGFPQQLRQ FGWTIEYRDW TRADTLWMPR RLVMTYGELR ATLVANQWQL LSDT
|
| |