Gene Csal_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1526 
SymbollolB 
ID4029228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1738145 
End bp1738789 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID637966715 
Productouter membrane lipoprotein LolB 
Protein accessionYP_573578 
Protein GI92113650 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis 
TIGRFAM ID[TIGR00548] outer membrane lipoprotein LolB 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.191238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCACG TCTCGTCACC GCACCCTTGC GCCGCCATTG CCTCCGCCCG TGTCTGGCTG 
GGCCTCGTGC TCGTCGCCTT GCTGGCGGGC TGTGCCAGCC AGGCGCCCAG TCCCGATCAG
TCGCGTGACC GCGGCGACTG GGAGGCGCAG ATCGAGCGCC TGCAGACACT CGACGCCTGG
AGTCTCGCGG GCAAGGTCGG GCTTCGTACC AATGAAGGTT CCGAAAGCGC CAATATCGAC
TGGCAACAGC GCCCGGACAC GTACCGCATC CTGATCAGCG GCCCCTTCGG CGCCGGCCGC
ACCCTGCTCA CGGGGCGCCC CGGCGCGGTG ACGCTGACCA ATGGTGAAGG ACGTTTCGAG
GCCGAGACAC CGGAAGCCCT CATGGAGCAG CAACTGGGCT GGTCGCTGCC CATCTCGGCG
CTCGACTACT GGGTACGCGG CCTTCCCGCC CCCGAGGGCG GCGAGCGCAT CGAGCACGAT
GAACAAGGCT TCCCGCAGCA GTTGCGTCAG TTCGGATGGA CGATCGAATA TCGAGACTGG
ACACGCGCCG ACACGCTGTG GATGCCGCGC CGGCTGGTCA TGACCTACGG CGAGCTGCGC
GCCACTCTGG TCGCCAACCA GTGGCAGCTG CTGAGCGATA CATGA
 
Protein sequence
MKHVSSPHPC AAIASARVWL GLVLVALLAG CASQAPSPDQ SRDRGDWEAQ IERLQTLDAW 
SLAGKVGLRT NEGSESANID WQQRPDTYRI LISGPFGAGR TLLTGRPGAV TLTNGEGRFE
AETPEALMEQ QLGWSLPISA LDYWVRGLPA PEGGERIEHD EQGFPQQLRQ FGWTIEYRDW
TRADTLWMPR RLVMTYGELR ATLVANQWQL LSDT