Gene Csal_1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1419 
Symbol 
ID4027971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1606001 
End bp1606945 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content67% 
IMG OID637966603 
Productinner-membrane translocator 
Protein accessionYP_573472 
Protein GI92113544 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCT CCGGCATCGC CTCGTACCTG ATCTCGTTTC TGACCTTCGC CGGCGTCTAC 
GCCGTTCTCG CGCTGGGCCT CAACATGCAG TGGGGCTTCA CCGGTCAGTT CAACATCGGC
ATCGCCGGCT TCTTCGCGGT CGGCGCCTAT ACCAGCGCGA TCCTCACCAC GCCGTCTAGT
CCCGCCTACC TGGGCGGCTT CGGCATGCCG TTTCTGGTCG GCCTGGCCGG TGCGGTCATC
GCCTCGACGC TGCTCGGCCT GGTCGTCGGC CTGATCACCG CGCGGCTGCG CACCGACTAC
CTGGCCATCG CCTCGATCGG CATCGCCGAG ATGGTCCGCC TGTTCGTCAA GAACGAGGAC
TGGCTGACCA ACGGCGTACG CGGCATCGCC GGCATCGAGC GGCCGTTCGC CGACACCGTG
CTGGATAGCC CGCTCACCTA TCTGGTGATC GTGGCACTGT TCGTCGCCGG GGTGTATTTC
CTGGTCGAGC GCGCCTACGC CTCGCCCTGG GGCCGCGTGC TGCGCGCCAT TCGCGAGAAT
GAGCCGGCCA CCGCGGCGGC CGGCAAGTCG ATCGCCGGCT TCCGACTGCA GGCCTTCGTG
CTGGGCTCGG CGATCATGGG CCTGGGGGGC GGGCTCTATG CCCACTTCTT CGGCTTTCTC
AGCCCCGAGG CGTTCATGCC GCTCTATGGC ACCTTCCTTG TCTGGGTGAT GCTGATCGCC
GGCGGCAGCG GCAACAATCG TGGCGCGATT CTCGGCGCCG TCCTGGTATG GGGCGTGTGG
TCGGGGACCG AGCTGCTCAC CGGCTTGCTG CCCGCCGAGC ATGCCACCCA GGGCGCGGCC
CTGCGCGTGC TGCTGATCGG AGTGCTGTTG CAAGTCATCC TGGTCACTCG GCCAGAGGGG
GTGCTCCCCG AGAAACCGCC CAGGCTGATC GCCAGAAAGC GCTGA
 
Protein sequence
MELSGIASYL ISFLTFAGVY AVLALGLNMQ WGFTGQFNIG IAGFFAVGAY TSAILTTPSS 
PAYLGGFGMP FLVGLAGAVI ASTLLGLVVG LITARLRTDY LAIASIGIAE MVRLFVKNED
WLTNGVRGIA GIERPFADTV LDSPLTYLVI VALFVAGVYF LVERAYASPW GRVLRAIREN
EPATAAAGKS IAGFRLQAFV LGSAIMGLGG GLYAHFFGFL SPEAFMPLYG TFLVWVMLIA
GGSGNNRGAI LGAVLVWGVW SGTELLTGLL PAEHATQGAA LRVLLIGVLL QVILVTRPEG
VLPEKPPRLI ARKR