| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1329 |
|---|
| Symbol | |
|---|
| ID | 4027724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1517301 |
|---|
| End bp | 1519982 |
|---|
| Gene Length | 2682 bp |
|---|
| Protein Length | 893 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637966508 |
|---|
| Product | nitrate transporter |
|---|
| Protein accession | YP_573383 |
|---|
| Protein GI | 92113455 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACG CCAACACGCA CAATGAACAA CGTCGTGCTC TAGGGCTTTC CACGCTGGCC
TTCACAGTGT GTTTTGCAGT ATGGACGCTG TTTTCCATAC TCGGTTTGCA GATCCGTCAA
GAGTTCGCGC TGTCGGACAC CCAGCTCGGT CTGCTGATGG CGACGCCGGT GCTCACCGGA
TCGATCAGCC GCCTGTTTCT GGGCATTCTC ACCGACCGCT TCGGTGGGCG CTGGGTGTTC
AGCCTGTTGA TGCTGGTCAC CGCCGGCTGC GTCTACCTGC TGACGTTCGC CAACAGCTAT
CCCATGCTGC TGCTTGCCGC CTTGGGGATC GGCCTGGCCG GCGGCTCGTT CATCGTCGGC
GTGGCGTACA CCTCGGCCTG GTTCGAGCGC GAGCGGCAGG GCACGGCGCT AGGCATCTTC
GGCGCCGGTA ACATCGGCGC GGCGGTGACC AACTTCGGTG CTCCTTTCCT GCTGCTGACA
TTGGACTGGA GAGGAGCGGC GCTGGTCTAT GCAACGGGCC TGGCGGCGAT GGGGATAGTC
TTCCTGCTGC TGGCCAGGAC CGATCCGCAG AGCGAGCGAC GGCGTGCCGA TGCCGTACCA
CTCACGCAAC AGTTGGCGCC ACTGGCCGAG CTGCGCGTGT GGCGGTTCTC GCTGTACTAC
TTTTTCGTCT TCGGCGGCTT CGTCGCCCTG GCGCTGTGGC TACCGCATTA CCTGGTCGAG
GTCTACGGCC TGAGCATTAC CGCCGCCGGT ATCGTCGCGG CGCTGTATAC CATCCCGGCA
TCGCTGTTTC GCATCCTCGG CGGCTGGCTC TCCGACCGCT ACGGGGCGCG GCGGGTGATG
TACTGGACCC TGATTGTCTC GGTGGCATGC AGCTTCCTGC TCAGCTATCC GCCGACCCAC
TACAGCGTGC AAGGCGTTCG CGGCACCCTG GAATTCTCGT TTGCCATCAA TCTGATCGGC
TTCATTGCGC TGATCATGGT GCTGGGCTTC TTCATGTCGC TGGGCAAGGC AGCGGTGTTC
AAGCACATCC CCAGCTACTA TCCCCAGCAT GTCGGCGCGG TCGGTGGCGT GGTGGGCATG
GTCGGCGGCC TGGGCGGTTT CTTTCTGCCG CTGACCTTCG GCATGCTCAA CGATGTGGTG
GGCATCTGGC AGAGCTGCTT CATGCTGCTG TTCGTGGTCT CCGGCGCGGC GCTGGCATGG
ATGCACTACG CGATCCTGCG TGCCAGTCGC CAGGAGTGGC GCAGCGGTCA CGAGGTCACC
GACCTGCCGG AGCTGTCCAC GCCCAGCCGC TTCGTACTCC AGGATTGGCG CCCCGAGGAT
CCGGATTTCT GGGCCGAGAA GGGCAGGCGC ATCGCCACGC GCAACCTGTG GATCTCGATT
CCCAACTTGC TGCTGGCCTT CGCAGTGTGG ATGGTCTGGT CGGTGGTGGT GGCCAAGCTG
CCCCAGGTGG GCTTCGACTA CAGCTCCAAC CAGCTGTTCT GGCTGGCTGC GCTGCCGGGC
CTGTCCGGCG CCACATTACG CATCTTCTAC AGTTTCATGG TGCCGATCGT CGGCGGTCGG
CGTTTTACCG CGCTGTCCAC TGCCTCGCTG GCGTTGCCGG CGCTATGGAT CGGCTTCGCC
GTGCAGAACC CCGAGACCCC CTATCTGGTG ATGCTGATCC TGGCACTGCT GTGCGGTTTC
GGCGGCGGCA ACTTCGCCTC GAGCATGGCC AACATCTCGT TCTTCTATCC CAAGCGCGAG
AAGGGCAACG CTCTGGCGCT CAATGCCGGG CTGGGCAACC TCGGTGTCAG TGTCATGCAG
TTCCTGATCC CGCTGGCGAT CACCGCCGGG GTGTTCGGTG CACTGGGTGG CGAGCCTCAG
GCCCTGAACG ACGGCGATCG CATGTGGCTG CAGAACGCCG GTTTCGTCTG GGTGCCGTTC
ATCCTGCTCG GTGCCGTGGC GGCATGGTTC GGCATGAACG ACATCGCCAG CGCCAGATCC
TCGTTCAAGG ATCAGGCGGT GATCTTCAAG CGCAAGCACA ACTGGCTGAT GTGCGTGCTC
TACACCGGCA CCTTCGGCAG CTTCATCGGC TACTCCGCGG GCTTTCCACT GCTGGCCTCC
AACCAGTTCC CGGAGGTCGA CGTGCTGCAG TTCGCCTTCC TGGGACCCCT GGTGGGCGCG
TTGTCCCGCG CCGGCACCGG CTGGATCTCC GACCGTTTCG GCGGCGCCCG AGTCACCCTG
TGGGTGTTTG CGGCGATGAT TGCCTGCGTG GCCGGCGTGC TGTTCTTCCT CGGCATCAAG
GACCAGCCGG GGGCGTTCTG GGGTTTCTTC GCCATGTTCC TGCTGCTGTT CTTCTTCACC
GGGGTGGGCA ACGCCAGCAC CTTCCAGATG ATTCCCGAGA TCTTCCGCCA GGAGGTGGCG
CGGCTGATGC CATCGCTCGA TGCGGACGCC CAGCGCCAGC AGAGCGAGAA GGAGTCGGCG
GCGACCATCG GTTTCACCTC GGCGATCGCC GCCTACGGTG CCTTCTTCAT TCCCAAGACG
TTCGGCAGCT CCATTGCCCT GACCGGTGGT GCCGAGATGG CGTTGTACGG CTTCATCGTC
TTCTACGCGA TCTGCGTGGG ACTGACCTGG TTTTATTACA CACGCACCAA CGCCGAGATC
CGCTTTCAGG CGGACCGCCT CGTCATGAAC CCGAGCCGCT GA
|
|---|
| Protein sequence | MANANTHNEQ RRALGLSTLA FTVCFAVWTL FSILGLQIRQ EFALSDTQLG LLMATPVLTG
SISRLFLGIL TDRFGGRWVF SLLMLVTAGC VYLLTFANSY PMLLLAALGI GLAGGSFIVG
VAYTSAWFER ERQGTALGIF GAGNIGAAVT NFGAPFLLLT LDWRGAALVY ATGLAAMGIV
FLLLARTDPQ SERRRADAVP LTQQLAPLAE LRVWRFSLYY FFVFGGFVAL ALWLPHYLVE
VYGLSITAAG IVAALYTIPA SLFRILGGWL SDRYGARRVM YWTLIVSVAC SFLLSYPPTH
YSVQGVRGTL EFSFAINLIG FIALIMVLGF FMSLGKAAVF KHIPSYYPQH VGAVGGVVGM
VGGLGGFFLP LTFGMLNDVV GIWQSCFMLL FVVSGAALAW MHYAILRASR QEWRSGHEVT
DLPELSTPSR FVLQDWRPED PDFWAEKGRR IATRNLWISI PNLLLAFAVW MVWSVVVAKL
PQVGFDYSSN QLFWLAALPG LSGATLRIFY SFMVPIVGGR RFTALSTASL ALPALWIGFA
VQNPETPYLV MLILALLCGF GGGNFASSMA NISFFYPKRE KGNALALNAG LGNLGVSVMQ
FLIPLAITAG VFGALGGEPQ ALNDGDRMWL QNAGFVWVPF ILLGAVAAWF GMNDIASARS
SFKDQAVIFK RKHNWLMCVL YTGTFGSFIG YSAGFPLLAS NQFPEVDVLQ FAFLGPLVGA
LSRAGTGWIS DRFGGARVTL WVFAAMIACV AGVLFFLGIK DQPGAFWGFF AMFLLLFFFT
GVGNASTFQM IPEIFRQEVA RLMPSLDADA QRQQSEKESA ATIGFTSAIA AYGAFFIPKT
FGSSIALTGG AEMALYGFIV FYAICVGLTW FYYTRTNAEI RFQADRLVMN PSR
|
|---|
| |