| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1315 |
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| Symbol | |
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| ID | 4027769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 1497297 |
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| End bp | 1499123 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637966494 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_573369 |
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| Protein GI | 92113441 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.243862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCATT CATTCTATGC CCGCATGGTC ATCGCGGCGG TCATGCCTTT CATGGTCATG
CTGACGGGCT GCATCACGCT CTACCAGGCG TCTCAGGCGG AACAGCACAC GGCACGCAGC
GTCGCACAGA CGCTGGGCGT GATCGCCGAT GCCAATCATC TGATGCGTCT GTTCATGGAT
GCCGAGACCG CCCAGCGTGG CTACGCGCTC ACCAGAGACG GCGATTACCT GGCACCCTAC
CAGCGGGCCC TGAGCATGTT TCCGCGTACC CTGGGAACCC TGCGTGACAG CGTCCAGGGC
GAGACGCAGC AACAGCGTCT GGCACGTGCC AACCGGCTGT TCCGTCAGTG GGTGAAAAAC
GTCGCCAATG TCAGCATCGT CGAAACACAA GGCAACGGCA GCGGCCTGCC GGGGGCTGCG
ACGCCTGCCA GCAAACGCCT GGTGGACGAG TTTCGCGTGA TCATGGGCAA CTTCATCGAT
ACCGAGGAGG CGTCCCTGCA TGTACGCCAA TCCGACAGCC GTGATGCCGC TATGAATGCA
CAGCGGATCA TGATCGTCAG TATCCTCCTG GCGCTCGCCG GTGCCCTGGT CACCTGGTGG
CCGCTTTTCC AGCGCACACG ACATGCCGTG ATGGAGATTA CCCAGCGTTC GCGGCGCATG
GTGGAAGGCG ACCTCAGCCA GCGCGTCATA CTGCCCGGGC GCGATGAATT TGCCTGGATG
GCACACGCCT TCAATGCCAT GGCGGCACGC CTCGAAGCCC TGGTCATCAC CGAAAAACGC
ACCAGCCGAG AACTCGCCGA ACGCGTCCAT GCCCTGGTTC AGGAGCGTAC GCGCGACATG
CGGGCTCGCC ATGCCTTGAT CGAAACCCTG CAAGCCTGCC GCGACACCCG CAGCGCCCAG
GACGCCCTGC GCGATCAATT GCCTCATGTC TTTTCCCACG CACGGGGCGG CGCGCTGTGG
TGCCTGGACA TGCATTCTCC GCAGCCGCCT CAGCGTGTGT GTCACTGGGG CGATGCGCCG
GAAAACGACG TGCAAACGTT CCAGACGTGT CATGCCCTGC ACACGGGCCA GCCGCAGGAC
ATCGCACTGC CATCGGCACG ACACGCCAGC GTATGCCCGC ACGTGCTGGC GTCACCGACG
CCCGGACGTC ATTTGTGTCT GCCACTGAAG GGCTCGGAGG GCATTCTCGG CGTGTTGCAG
GTGCACTGGC TGCCCGAGCG CGATGCCGAC GACGACAACG ATGCCCGCGT CGACTTCGCC
AAGGGCGTCG CCGAGGACAT GGTATTGTCC CTGAGCAACG TTCGGCTGCG TGAACAACTC
GAGGAGGCCA GCATCCGCGA TGCCTTGACG GGCCTGTACA ACCGGCGTTT CCTGGACGAG
ACCCTGGCGC GCGAACTGGC GCGTGCCGAG CGGCAAGCGG TCCCCTTGTG CGTGCTCATG
CTGGATATCG ATCATTTCAA GCCGATCAAT GACGATTACG GGCATGCATT GGGCGACCGA
GCACTGGTCG CGGTAGCCGA ACTGCTGAAC GCCCATGTCA GGCGCGACGA TATCGTATGC
CGCTACGGTG GGGAGGAATT CGTGATCATC ATGCCCGGCG CCGGCCTGGA TGCCGCACAG
CGGCGTGGCG ACCATTTACG CCGTTGCGTC AGCGCGCTGG ACGTCGAGGC GAATGTCCCG
GCGCCGATAC GCTTGACCGT GTCTCTGGGG CTCGCCTGTT ACCCGCAACA TGGCGACAAC
GCGGAACACC TGCTGCACAG TGCCGACATG GCGCTCTACG AAGCCAAGCA AGGCGGCCGC
AATCGCCTGA CGATCGCTTC GCCGTGA
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| Protein sequence | MPHSFYARMV IAAVMPFMVM LTGCITLYQA SQAEQHTARS VAQTLGVIAD ANHLMRLFMD
AETAQRGYAL TRDGDYLAPY QRALSMFPRT LGTLRDSVQG ETQQQRLARA NRLFRQWVKN
VANVSIVETQ GNGSGLPGAA TPASKRLVDE FRVIMGNFID TEEASLHVRQ SDSRDAAMNA
QRIMIVSILL ALAGALVTWW PLFQRTRHAV MEITQRSRRM VEGDLSQRVI LPGRDEFAWM
AHAFNAMAAR LEALVITEKR TSRELAERVH ALVQERTRDM RARHALIETL QACRDTRSAQ
DALRDQLPHV FSHARGGALW CLDMHSPQPP QRVCHWGDAP ENDVQTFQTC HALHTGQPQD
IALPSARHAS VCPHVLASPT PGRHLCLPLK GSEGILGVLQ VHWLPERDAD DDNDARVDFA
KGVAEDMVLS LSNVRLREQL EEASIRDALT GLYNRRFLDE TLARELARAE RQAVPLCVLM
LDIDHFKPIN DDYGHALGDR ALVAVAELLN AHVRRDDIVC RYGGEEFVII MPGAGLDAAQ
RRGDHLRRCV SALDVEANVP APIRLTVSLG LACYPQHGDN AEHLLHSADM ALYEAKQGGR
NRLTIASP
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