Gene Csal_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1300 
Symbol 
ID4027661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1485358 
End bp1485825 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content65% 
IMG OID637966479 
Product17 kDa surface antigen 
Protein accessionYP_573354 
Protein GI92113426 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.843728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTT TACTTCCCCT GGTCATGATC GGAGCCCTGG GCATTGCCGG TTGCGCCAAC 
ACCTCGCCCT ATTCCGGCGA TGTCTACCGC AGCGGACAGG CCGAAACGGC TCAGTCCGTG
ACATACGGGA CCATTACCTC GGTTCGTCAG GTACAGATCC AGGCCGGTGA ACAGAATGAA
AGCATTCTGG GTGGCCTGGG CGGCGCCGTG CTCGGCGGCC TGCTCGGCAA CCAGGTCGGG
GGTGGCTCGG GGCGCACCAT CGCTACCGCC GCCGGGGCCA TCGGGGGCAG CGTCGCCGGC
AGCAAGGTCG AGAATGCCGC CAACCGCACG AACGCCTGGG AGATAGAAAT CCGGCGTGAC
AGCGGCGACT CCATCGTGGT GGTCCAGAAA GCCGATCGCG ACTGGCAGGT CGGCCAGCGC
GTTCGCATGA TCGGCAGTGG CGCCAACCTG AGCGTCGCGC CTTACTGA
 
Protein sequence
MKALLPLVMI GALGIAGCAN TSPYSGDVYR SGQAETAQSV TYGTITSVRQ VQIQAGEQNE 
SILGGLGGAV LGGLLGNQVG GGSGRTIATA AGAIGGSVAG SKVENAANRT NAWEIEIRRD
SGDSIVVVQK ADRDWQVGQR VRMIGSGANL SVAPY