Gene Csal_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1293 
Symbol 
ID4027654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp1479525 
End bp1480142 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content65% 
IMG OID637966472 
ProductNLP/P60 
Protein accessionYP_573347 
Protein GI92113419 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0496746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGAA TCATGGCGCT GGGCTTGCTG TTGTCGGTAC TGGCCGGCTG TGCAGCGACG 
TCCCCGCAAT CTCCTGCTGC ACACCCGTCT TCCCTGTCGG CCGCCGCCCG GATCGGCGAA 
GCGGCGAATG GCATGACGGG ACCCGAATCG CTTCTCGCCA CGTACCGTGC CAGCGATGTC 
CAGCGCGCCC TGGTGTCGCC GGCGCGCATA CGCGAGGCCT TGCTGTCCGA GCACGAACGC 
TGGGTGGGGA CGCCCTATCG TCTCGGTGGC ACCACGCGGC GTGGTATCGA CTGTTCCGCC 
TTGATGCAAC ACGTCTACAG CGATGCGTTC CAGCTGTCCC TGCCGCGCAC CACCGACCAG 
CAGATGCAGG AAGGCCGCCG CATCTCGCGT GATGCGCTGA AGGCCGGCGA CCTGGTGTTC 
TTCCGCTCGC CCGGCCCCTA CAACCATGTA GGCGTCTATG TCGGCGATGG CTATTTCTTG 
CACGCATCGA CCTCGCAGGG CGTCAAGCTT TCCCGTCTCG ACAACGTCTA TTGGAATCGT 
CATTACTGGC AGTCACGGCG TCCGCTGGAG AGCACGCAAC TTGCGGCACG GCTCGAGCGG 
TCTGCGCACG AGGGCTGA
 
Protein sequence
MLRIMALGLL LSVLAGCAAT SPQSPAAHPS SLSAAARIGE AANGMTGPES LLATYRASDV 
QRALVSPARI REALLSEHER WVGTPYRLGG TTRRGIDCSA LMQHVYSDAF QLSLPRTTDQ 
QMQEGRRISR DALKAGDLVF FRSPGPYNHV GVYVGDGYFL HASTSQGVKL SRLDNVYWNR 
HYWQSRRPLE STQLAARLER SAHEG