Gene Csal_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1250 
Symbol 
ID4027628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1429203 
End bp1429994 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content64% 
IMG OID637966428 
ProductAraC family transcriptional regulator 
Protein accessionYP_573304 
Protein GI92113376 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCA GCATCCGTCT GACACCGCTC GACAATGCGG TCAAGCATCA CGATCATGCC 
TTCCACCAGA TCGTCATCGG CCTCGCCGGG CATGCCGAGT TCGAGATCGA GGGCCTGGGC
GGCACCATTG CGCCGCTTTC CGGATGCATC GTGCCTACCA GTCATGTGCA CTACTACGAG
GGCATCGGCG ACAATCGCCA GTTGATCCTC GACCTCCCCG ACGATGCCCC CTCGTTGACG
GGCGCCCACC GCGAACTGGC CCGACTGTTC GATGCGCCGC GCTACTTCAC GCTCGACGAC
CCCTTGCGCA ACTACCTCAA TTTCGTGGTG CAGGAAATGT CGCAACCGCG TCACGCCGAT
GGCGAACTCC TCGCCACGAC GTTCCTGAGC TGTCTTCACG CTCGCCTGGC CCCGGACTTT
CACCCTCTCG CGTCGGGTCG CCCCCTGGCT CTCGATGCCA TCGACCGTTA TATCGAAAAC
CACCTCGCCG AACGCATCAC GGTCGGCGAC CTGGCTCGCC TGGCGTGCCT GAGCGAAGCC
CACTTCAGCG AGCGGTTCCG CCGGCACACG GGACTGACGC CCTATCAATA CTTGTTGCGT
CGGCGACTCG AACACGCCAG CGCGCTCCTG CGTGGCGCCG CCATCCCGCT CAGCGACGTC
GCAGCGCGTA CCGGCTTCGC CAGCCAAAGC GCCCTCTCGC ACGCCTTCCG CCGCCACTAC
GGTCAGCCAC CGTCTCGATT GCGGCGCAAT GGGGCGACGC CATTGGCGGC TACTCATCAC
AACATCGACT AA
 
Protein sequence
MTSSIRLTPL DNAVKHHDHA FHQIVIGLAG HAEFEIEGLG GTIAPLSGCI VPTSHVHYYE 
GIGDNRQLIL DLPDDAPSLT GAHRELARLF DAPRYFTLDD PLRNYLNFVV QEMSQPRHAD
GELLATTFLS CLHARLAPDF HPLASGRPLA LDAIDRYIEN HLAERITVGD LARLACLSEA
HFSERFRRHT GLTPYQYLLR RRLEHASALL RGAAIPLSDV AARTGFASQS ALSHAFRRHY
GQPPSRLRRN GATPLAATHH NID