Gene Csal_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1246 
Symbol 
ID4027624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1422665 
End bp1423693 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content63% 
IMG OID637966424 
Productglycosyl transferase family protein 
Protein accessionYP_573300 
Protein GI92113372 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000114042 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGGTC CCACGGTAGT GTCTGAACAT GAAGGTCATG AGGCGTCCCC GCATCGCGCA 
GCGGGCGATT GGCTGCTATC CATCGTGGTG CCGGTCATGA ACGAGGAGGG CGCCATCGGC
GCGTTTCTTG CGGCCGTCGA CAAGGCGCTC GATGGGCACG TCGCACGCTG GGAGGTCGTG
TTCGTCGACG ATGGCTCACG CGATGCGACG CTGGCGACCC TGCGCGACGC CAGCCGAGCG
GATGCGCGCG TGCGCTATCT GTCGCTGACG CGCAATTTCG GCAAGGAAGC CGCCCTGACG
GCGGGACTGG CGCACGCGCA CGGCGACGCC ATCGTGCCCA TGGACGTCGA CCTGCAGGAT
CCCCCGCACG TGATCCTCGA ATTCGTGCGC CTGTGGCGTG AAGAAGGATT CGACATGGTG
TACGGCGTTC GTGGCACGCG GGAGGAGGAT ACGCATACCA AGCGTGCCAC CGCCGGCTTG
TTCTATCGCT TCTTCAACCG CCTGTCGGAT ACACCGATTC CGCACAATGC CGGGGACTTT
CGGCTCATGG ACCGGCGAGT GGTGGATGCG CTCAATCGCC TGCCCGAGCG CAGTCGGTTC
ATGAAAGGAT TGTTTTCCTG GCCCGGGTAT CGCACCACCG GCGTGCGCTA CGCGCGTCCT
TCCCGCGAGA CGGGCAGCAG CAAGTTCAAC TACTGGAAAC TTTGGAACTT CGCCCTCGAT
GGCGTCGTGA GCTTTTCCAC CTGGCCACTG CGCATCTGGT CATACTGCGG CGCGGTGATC
GCCCTGATTG CCTTCCTGTA CATCGTGCTG CTGGTAGGAC GCGTGGTGCT GTTCGGCAGC
GATGTGCCCG GCTATGCCTC GCTGATGACC GCGATTCTGT TTTTCGGCGG CATGCAACTG
CTATCGATCG GCATCCTGGG CGAGTACGTG GGGCGGTTGT TCATCGAGAC CAAGCAGCGT
CCGTTGTACC TGGTGGCCGA AGACAGCGAG ACGCTGCATG CCCCCCGCCG TGAAGGTCCC
GCTGCATGA
 
Protein sequence
MEGPTVVSEH EGHEASPHRA AGDWLLSIVV PVMNEEGAIG AFLAAVDKAL DGHVARWEVV 
FVDDGSRDAT LATLRDASRA DARVRYLSLT RNFGKEAALT AGLAHAHGDA IVPMDVDLQD
PPHVILEFVR LWREEGFDMV YGVRGTREED THTKRATAGL FYRFFNRLSD TPIPHNAGDF
RLMDRRVVDA LNRLPERSRF MKGLFSWPGY RTTGVRYARP SRETGSSKFN YWKLWNFALD
GVVSFSTWPL RIWSYCGAVI ALIAFLYIVL LVGRVVLFGS DVPGYASLMT AILFFGGMQL
LSIGILGEYV GRLFIETKQR PLYLVAEDSE TLHAPRREGP AA