| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1215 |
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| Symbol | sdhA |
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| ID | 4027536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1389421 |
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| End bp | 1391193 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637966393 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_573269 |
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| Protein GI | 92113341 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAATA TGCGTAGCCT GACATTCGAC GCAATCATCA TCGGCGGTGG TGGCTCCGGC
CTGCGCGCCG CGCTCGAGCT GGCCAAGTCG GGCAAGAAGA CGGCGGTCAT CACCAAGGTC
TTCCCGACGC GCTCGCACAC CGTTTCCGCA CAGGGCGGCA TTACCTGCGC CATCGCTTCC
GCCGATCCCA ACGACGATTG GCGCTGGCAC ATGTACGACA CCGTCAAAGG CGGTGACTAC
ATTACCGACC AGGAAGCCGC CGAGTACATG TGTTCCGAAG GGCCCAAGGC GGTCTTCGAG
CTGGAACACA TGGGGCTGCC GTTTTCACGC TTCGACAACG GCCGCATCTA TCAGCGCCCC
TTCGGCGGTC AGTCCAAGGA CTTCGGCAAG GGCGGCCAGG CCGCGCGGAC CTGTGCCGCC
GCCGACCGTA CCGGCCATGC GCTGCTGCAT ACCTTGTATC AGAACAACCT GAAGAACAAC
ACCGTCTTCC TGAACGAGTG GTACGCGGTC GATCTGGTCA AGAACGCCAA CGGCGACGTG
GTCGGCTGCA TTGCCATGTG CATCGAGACC GGTGAAGTCG TGCACATCAA ATCCAAGGCG
ACGGTGCTGG CCACCGGCGG CTCGGGCCGC ATCTACGCGT CCACGACCAA TGCCCTGATC
AATACCGGCG ACGGGATCGG CATGGCCCTG CGTGCGGGCT TCCCCATGCA GGACATGGAA
ATGTGGCAGT TCCACCCCAC CGGCATTTAC GGCGCAGGGG TGTTGGTCAC CGAAGGCTGT
CGTGGCGAAG GCGGCTACCT GATCAACAAG GACGGCGAGC GCTTCATGGA GCGTTATGCG
CCGAACGCCA AGGACCTCGC CGGTCGTGAC GTCGTGGCGC GCGCCATGGT CATGGAGATC
CTGGAAGGTC GTGGCTGCGG CGAAAACGGC GATCACGTCA TGCTCAAGCT CGATCACCTG
GGTGAAGAGG TACTGAGCAA GCGTCTGCCG GGGATCGTCG AACTCTCCAA GACCTTCGCT
CACGTCGATC CGGCCAAGGA TCCGATTCCC GTCGTGCCGA CGTGTCACTA CATGATGGGG
GGCGTGCCGA CCAACGTGCA CGGCCAGGCC ATCATGCAGG ATGCCGACGG CAACGATCAG
ATCGTCAACG GCCTGTTCGC CTGCGGCGAA GCGGCATGCG TCTCGGTGCA CGGCGCCAAC
CGTCTGGGCG GCAACTCGTT GCTCGACCTG GTGGTGTTCG GGCGTGCTGC CGGCATGTTC
ATCGAGGAAG CCCTCAACGA GGGGGTCGAT TACCTCGAGG CGGCCCAGTC CGACATCGAC
AGCGCCATGG CGCGCATCAC TCGCTGGGAC GAGTCCAGCG GCGGCGAAGC GGTGCCCGAC
CTGCGCGCCG AACTGCAGGA CATCATGCAG AATGACTTCG GCGTCTTCCG TCAGGAAGAC
AACATGCAGC AGGGCGTCAA GAAGCTGGCC GATCTGCGCG AGCGCATCGC CAATGCTCAC
TTGTCCGACA AGTCCAACGC CTTCAACACC GCGCGTGTCG AGGCGCTGGA GCTCGACAAC
CTGCTCGAAG TTGCGGAGGC TACGGCCATT TCCGCCCTGG AGCGCAAGGA AAGCCGTGGT
GCGCATTCGC GCTACGACTA CCCGGACCGC GACGACGCCA ATTGGCTCAA GCACTCCATG
TACTTCCCGG TCGAAAAGCG CCTGGGACAG CGTGATGTGA ACTTTGCGCC GAAGACCGTC
GATACCTTCG AGCCGAAAAT CCGCACTTAC TAA
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| Protein sequence | MSNMRSLTFD AIIIGGGGSG LRAALELAKS GKKTAVITKV FPTRSHTVSA QGGITCAIAS
ADPNDDWRWH MYDTVKGGDY ITDQEAAEYM CSEGPKAVFE LEHMGLPFSR FDNGRIYQRP
FGGQSKDFGK GGQAARTCAA ADRTGHALLH TLYQNNLKNN TVFLNEWYAV DLVKNANGDV
VGCIAMCIET GEVVHIKSKA TVLATGGSGR IYASTTNALI NTGDGIGMAL RAGFPMQDME
MWQFHPTGIY GAGVLVTEGC RGEGGYLINK DGERFMERYA PNAKDLAGRD VVARAMVMEI
LEGRGCGENG DHVMLKLDHL GEEVLSKRLP GIVELSKTFA HVDPAKDPIP VVPTCHYMMG
GVPTNVHGQA IMQDADGNDQ IVNGLFACGE AACVSVHGAN RLGGNSLLDL VVFGRAAGMF
IEEALNEGVD YLEAAQSDID SAMARITRWD ESSGGEAVPD LRAELQDIMQ NDFGVFRQED
NMQQGVKKLA DLRERIANAH LSDKSNAFNT ARVEALELDN LLEVAEATAI SALERKESRG
AHSRYDYPDR DDANWLKHSM YFPVEKRLGQ RDVNFAPKTV DTFEPKIRTY
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