Gene Csal_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1198 
Symbol 
ID4027343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1373441 
End bp1374742 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content60% 
IMG OID637966375 
ProductFAD dependent oxidoreductase 
Protein accessionYP_573253 
Protein GI92113325 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCGGG AGCAAACCGT GCTGGCAACG TCTTATCCTC AGTCCTATTA CGCGGCGTCC 
GCCAATGACG CGCGAGCAAG ACCGCCCCTG CTGGGTCATG TAAAGGCAGA CATTTGCATC
ATCGGCGCCG GTTTTACCGG CATGTCCACC GCCCTCCACA TGGCCGAGAA TGGCTACAAC
GTGGTTGTCC TGGAAGCCAA CCGCATCGGA TTCGGTGCTT CCGGCCGCAA TGGCGGACAG
ATCGTCAACA GCTACAGTCG CGACATCGAC TTCATCGAGC GCCAGTACGG CCAGAAGGTC
GGCGCCGAGA TGGGCCGGAT GGCCTTCGAG GGCGGGCGTA TCCTGCGCCG CTTCATCAAA
GACTACGGCA TTCAATGTGA CCTGAAGGAA GGCGGCATTT TCGCTGCATG CAACCGCAAG
CAGTTCGATG AGCTGGTCGA GAAAAAAAAG CTCTGGGAAA AACACGGCCA CGAACAGCTC
GAGCTTCTCG ACGCACATGC CATCCAGCAA TACGTGGGAA CCGAGCGCTA CGCCGGTGGC
CTTATCGATC ACAGCGGCGG GCATTTCCAC CCCCTGAACC TGGTGCGTGG TGAAGCCGAC
GCCGTGGAGT CCCTGGGCGG AACCATTTAC GAAGAGTCCC CGGCACTGCA CGTTCGCGAA
GGTGACAAGC CGGTCGTTCA TACAGAGCAA GGCAGTGTCG AAGCAGACTA CGTGCTGGTC
GCCGGCAACG CCTACCTCAA TGGCCTGCTG CCAGAACTGG AGTCCAAGGC CATACCTTGC
GGCACCCAGA TCATCACCAC CGAGCCCCTG CCGGAAAGGG TACAACGGCG CTTGCTCCCG
AAAGACAATT GCGTCGAGGA CTGCAATTAC CTCCTGGACT ATTTTCGCCT GTCCGGTGAT
GGCCGGCTGG TCTATGGCGG CGGCGTCACA TACGGCGCGC GTGAGCCGGC AAAAATCGAG
GCATTGATCG TCCCGAAGAT GCTCAGGACA TTCCCGGAGT TGAAAGACAC GAAAGTGGAT
TTTGCCTGGA CCGGCAACTT CCTTTTGACG CTGACGCGTC TCCCGCAGTT CGGTCGCATC
GGAACGAACA TCTACTACGC GCAAGGCTAT AGCGGCCATG GCCTCACCTG CACCCATCTG
GCGGGCAAGG TGATCAGCGA TGCGATTCAG GGACAGGCTG AACGCTTCGA TATTTTCGCC
AGCCTGCCCC AGCACTCCTT CCCCGGAGGA CGAAGGCTGC AGGTTCCGCT CACCGCCATG
GGCGCCTGGT ACTATAACCT GCGCGACAGG CTGGGAATCT GA
 
Protein sequence
MVREQTVLAT SYPQSYYAAS ANDARARPPL LGHVKADICI IGAGFTGMST ALHMAENGYN 
VVVLEANRIG FGASGRNGGQ IVNSYSRDID FIERQYGQKV GAEMGRMAFE GGRILRRFIK
DYGIQCDLKE GGIFAACNRK QFDELVEKKK LWEKHGHEQL ELLDAHAIQQ YVGTERYAGG
LIDHSGGHFH PLNLVRGEAD AVESLGGTIY EESPALHVRE GDKPVVHTEQ GSVEADYVLV
AGNAYLNGLL PELESKAIPC GTQIITTEPL PERVQRRLLP KDNCVEDCNY LLDYFRLSGD
GRLVYGGGVT YGAREPAKIE ALIVPKMLRT FPELKDTKVD FAWTGNFLLT LTRLPQFGRI
GTNIYYAQGY SGHGLTCTHL AGKVISDAIQ GQAERFDIFA SLPQHSFPGG RRLQVPLTAM
GAWYYNLRDR LGI