Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1143 |
Symbol | |
ID | 4027708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 1306013 |
End bp | 1307584 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637966320 |
Product | Alpha-L-arabinofuranosidase |
Protein accession | YP_573198 |
Protein GI | 92113270 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATCA TTACCAATCC CGTCTTGCCT GGGTATCACC CGGATCCCTC GATGCTACGC GTAGACGACG ACTATTATAT CGCGGTGTCC ACGTTCGAGT GGTTTCCCGG CGTGCAAATC CACCATTCCA GAGATCTGGT GCATTGGCGG TTGCTCACGT ATCCGCTGAC GCGAACTACT CAGCTCGACA TGGTTGGCAA CATCGACTCG GGCGGTGTCT GGGCACCCTG CTTGAGCCAT GCCGATGGAG TCTTCTACCT GATCTATACC GATGTCAAAA GCCGAAAAGG CGCTTTCAAG GATACACATA ACTATCTCGT CACCGCCGAG AATATCGAAG GGCCCTGGTC CGACCCCGTC TATCTGAACA GTAGTGGCTT CGACCCTTCC CTGTTTCATG ATGATGATGG CTCGAGCTGG CTTCTGAACA TGATCTGGGA TTTCCGCCAG GGGGAAAACG CTTTCGCTGG CATCGCACTC CAGCGTTACG ACAGGATCAG TCAATCTCTG ACGGGGCCCG TGCACAACAT CTTCAAAGGG ACTCGACTCG GCGTAACGGA AGCGCCTCAC CTCTACAAGC GCAACGGATA TTATTATCTG ATCACGGCCG AAGGCGGTAC CGGATACACT CACGCCGTCA CGGTTGCGCG ATCAGCTTCC CTGCTGGGGC CCTACGAAGT CGATCCCGAC AACCCAGTCC TGACTTCCGA TCCAGGTCAG GCAGGGCAAT TGCAGAAGGC AGGGCATGCC AGCCTCGTCG AGACACAAAA CGGAGAGTGG TATATGGCCC ATCTATGCGC TCGCCCGGTC GTGGAGGACA AATGCATTCT CGGACGCGAA ACGGCCATCC AAAAATGTCA CTGGACCCAG GACGGATGGC TACGTGTCAT GGATGGTCCT CACCCCAGCA TCAACGTAGA GGCACCGAAG CTACCGCCCC ACCCCATGCC GATGGAAAAC GATCGGGATG AATTCTCTTC TCCCGAGCTG AAGGGCTACT GGAATTCACT ACGGCGACCC TTCGGCGAGG ACTGGATATC GCTCTCCGAA CGTCCTGGTT TCTTGCGTCT CAAAGGGGGC GAATCGATGC AGTCGATGCA TCGCCAAAGC CTGCTGGCAA GACGACTGAC CGACTTCCAT GTCGAGATCG AAACCCAACT CGAGTATTCG CCGGAAAATT TTCAACAGAT GGCAGGGCTG ATCATCTATT ACGATACGAC CGATTATGCC TACTTGTGTG TCACGCATCA TGAGGCACGG GGAAGATGTC TCGGCATCAT CGAGTCCCGC CATGGCCAAT ACGATGAGCT GCTGACGGAG AGAGTCGCAC TCCCGGAAGG CCCGATTCGC TTGATGGCAA CGATCCACAA CGAACGGCTG CAGTTCCACG TTGCGTCAGT CGATGAGGCG TGGCGCACCA TTGGCGACGT GATCGATATC CGCCATCTTT CCGATGATGC TGCCGATTAC ATACGTTTCA CCGGCACTTT CGTGGGACTC TGTGCACAGG ATCTAGGTGG CCGGCGCCGA GCCGCGGACT TCTCCTACTT TGACTATCGC CCTCTGCCAT AA
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Protein sequence | MAIITNPVLP GYHPDPSMLR VDDDYYIAVS TFEWFPGVQI HHSRDLVHWR LLTYPLTRTT QLDMVGNIDS GGVWAPCLSH ADGVFYLIYT DVKSRKGAFK DTHNYLVTAE NIEGPWSDPV YLNSSGFDPS LFHDDDGSSW LLNMIWDFRQ GENAFAGIAL QRYDRISQSL TGPVHNIFKG TRLGVTEAPH LYKRNGYYYL ITAEGGTGYT HAVTVARSAS LLGPYEVDPD NPVLTSDPGQ AGQLQKAGHA SLVETQNGEW YMAHLCARPV VEDKCILGRE TAIQKCHWTQ DGWLRVMDGP HPSINVEAPK LPPHPMPMEN DRDEFSSPEL KGYWNSLRRP FGEDWISLSE RPGFLRLKGG ESMQSMHRQS LLARRLTDFH VEIETQLEYS PENFQQMAGL IIYYDTTDYA YLCVTHHEAR GRCLGIIESR HGQYDELLTE RVALPEGPIR LMATIHNERL QFHVASVDEA WRTIGDVIDI RHLSDDAADY IRFTGTFVGL CAQDLGGRRR AADFSYFDYR PLP
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