Gene Csal_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1143 
Symbol 
ID4027708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1306013 
End bp1307584 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content56% 
IMG OID637966320 
ProductAlpha-L-arabinofuranosidase 
Protein accessionYP_573198 
Protein GI92113270 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3507] Beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCA TTACCAATCC CGTCTTGCCT GGGTATCACC CGGATCCCTC GATGCTACGC 
GTAGACGACG ACTATTATAT CGCGGTGTCC ACGTTCGAGT GGTTTCCCGG CGTGCAAATC
CACCATTCCA GAGATCTGGT GCATTGGCGG TTGCTCACGT ATCCGCTGAC GCGAACTACT
CAGCTCGACA TGGTTGGCAA CATCGACTCG GGCGGTGTCT GGGCACCCTG CTTGAGCCAT
GCCGATGGAG TCTTCTACCT GATCTATACC GATGTCAAAA GCCGAAAAGG CGCTTTCAAG
GATACACATA ACTATCTCGT CACCGCCGAG AATATCGAAG GGCCCTGGTC CGACCCCGTC
TATCTGAACA GTAGTGGCTT CGACCCTTCC CTGTTTCATG ATGATGATGG CTCGAGCTGG
CTTCTGAACA TGATCTGGGA TTTCCGCCAG GGGGAAAACG CTTTCGCTGG CATCGCACTC
CAGCGTTACG ACAGGATCAG TCAATCTCTG ACGGGGCCCG TGCACAACAT CTTCAAAGGG
ACTCGACTCG GCGTAACGGA AGCGCCTCAC CTCTACAAGC GCAACGGATA TTATTATCTG
ATCACGGCCG AAGGCGGTAC CGGATACACT CACGCCGTCA CGGTTGCGCG ATCAGCTTCC
CTGCTGGGGC CCTACGAAGT CGATCCCGAC AACCCAGTCC TGACTTCCGA TCCAGGTCAG
GCAGGGCAAT TGCAGAAGGC AGGGCATGCC AGCCTCGTCG AGACACAAAA CGGAGAGTGG
TATATGGCCC ATCTATGCGC TCGCCCGGTC GTGGAGGACA AATGCATTCT CGGACGCGAA
ACGGCCATCC AAAAATGTCA CTGGACCCAG GACGGATGGC TACGTGTCAT GGATGGTCCT
CACCCCAGCA TCAACGTAGA GGCACCGAAG CTACCGCCCC ACCCCATGCC GATGGAAAAC
GATCGGGATG AATTCTCTTC TCCCGAGCTG AAGGGCTACT GGAATTCACT ACGGCGACCC
TTCGGCGAGG ACTGGATATC GCTCTCCGAA CGTCCTGGTT TCTTGCGTCT CAAAGGGGGC
GAATCGATGC AGTCGATGCA TCGCCAAAGC CTGCTGGCAA GACGACTGAC CGACTTCCAT
GTCGAGATCG AAACCCAACT CGAGTATTCG CCGGAAAATT TTCAACAGAT GGCAGGGCTG
ATCATCTATT ACGATACGAC CGATTATGCC TACTTGTGTG TCACGCATCA TGAGGCACGG
GGAAGATGTC TCGGCATCAT CGAGTCCCGC CATGGCCAAT ACGATGAGCT GCTGACGGAG
AGAGTCGCAC TCCCGGAAGG CCCGATTCGC TTGATGGCAA CGATCCACAA CGAACGGCTG
CAGTTCCACG TTGCGTCAGT CGATGAGGCG TGGCGCACCA TTGGCGACGT GATCGATATC
CGCCATCTTT CCGATGATGC TGCCGATTAC ATACGTTTCA CCGGCACTTT CGTGGGACTC
TGTGCACAGG ATCTAGGTGG CCGGCGCCGA GCCGCGGACT TCTCCTACTT TGACTATCGC
CCTCTGCCAT AA
 
Protein sequence
MAIITNPVLP GYHPDPSMLR VDDDYYIAVS TFEWFPGVQI HHSRDLVHWR LLTYPLTRTT 
QLDMVGNIDS GGVWAPCLSH ADGVFYLIYT DVKSRKGAFK DTHNYLVTAE NIEGPWSDPV
YLNSSGFDPS LFHDDDGSSW LLNMIWDFRQ GENAFAGIAL QRYDRISQSL TGPVHNIFKG
TRLGVTEAPH LYKRNGYYYL ITAEGGTGYT HAVTVARSAS LLGPYEVDPD NPVLTSDPGQ
AGQLQKAGHA SLVETQNGEW YMAHLCARPV VEDKCILGRE TAIQKCHWTQ DGWLRVMDGP
HPSINVEAPK LPPHPMPMEN DRDEFSSPEL KGYWNSLRRP FGEDWISLSE RPGFLRLKGG
ESMQSMHRQS LLARRLTDFH VEIETQLEYS PENFQQMAGL IIYYDTTDYA YLCVTHHEAR
GRCLGIIESR HGQYDELLTE RVALPEGPIR LMATIHNERL QFHVASVDEA WRTIGDVIDI
RHLSDDAADY IRFTGTFVGL CAQDLGGRRR AADFSYFDYR PLP