| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1139 |
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| Symbol | |
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| ID | 4027704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1299011 |
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| End bp | 1300717 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637966316 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_573194 |
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| Protein GI | 92113266 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGA CTCCCGTTGC CTCGCCGACT TTCGCCGAGC TTTCGCTGCC GTCTACCATT
CTTTCGACGC TTGAAACCCT AGGCTATGAG ACGCCTTCGC TGATTCAGGC CAAAACCATC
CCCGCATTGC TCGAAGGCCG CGATGTGCTG GGACAAGCCC AGACCGGTAC CGGCAAGACT
GCCGCCTTTG CCTTGCCGCT ACTGTCGCGT CTCGACCTTC AGCGCCGCGA GCCGCAGGTG
CTGGTACTGG CGCCGACGCG CGAGCTGGCC CAGCAGGTGG CCGCTTCCTT CGTCCAATAC
GGTCGCGGCG TCAAGGGCCT CGAAGTGCTC AGCCTTTGCG GCGGCCAGGA ATATCGCGAA
CAGCTCAGCG GGCTGCGCCG TGGCGCTCAG GTGATCGTCG GCACGCCCGG TCGCGTGATC
GACCACCTCG ACCGTGGCAG CCTCAAGCTC GACGGACTCA ATGCGCTGGT GCTCGACGAA
GCCGACGAAA TGCTGCGCAT GGGCTTCATC GATGACGTCA AGCGCGTGGT CTCCGACACG
CCGAAGGATG CGCAGCGCGT GTTCTTCTCG GCCACGCTGC CCGATGAAAT CTCGCGCATC
GTCAACCATT ACCTGGTCGA CCCGCTGCGG ATCGCCATCG AAACCAAGAC CAAGACCGCC
GAAGGCATCG AGCAACGCCT GGTGCGCATC GAGGGCGGGG CCAAGCTGGA AGCGTTGTCG
CGTCTGCTCG AGGTCGAGCC GGTGGATGCC GCGATCGTCT TCGTGCGTAC ACGGGCGGCG
TGCACCACCC TGGTCGAGCA ACTGTTGCTG CGCGGCGTGA ATGCGGCGGC ACTGTCCGGG
GACCTGGACC AGAGCCTGCG CGAACGCACC GTCGAGCGCC TCAAGCGCGG CAAGGTCGAC
GTCCTGATCG CCACCGATGT CGCCGCGCGC GGCCTCGACG TGCCGCGTAT CACCCACGTC
TTCAACTATG ACCTGCCCCA GGACGCCGAA GCCTACACGC ACCGCATCGG GCGTACCGGC
CGTGCCGGGC GCACGGGCGT GGCGATCACC TTCGCCGGCG GTCGTGAGCA GCGTCGCGTA
CGTGACATGG AGCGCGTGAC CGGCCAGCAG ATGCAGGAAG TCGAGCTGCC GGACGAAGAC
GCGATTCGTG CCCATCGTAA CGAGCTTTTC CGCAAGCGTG TACTGGATAC GCTCGCTCGT
GGCAGCGACT ATCAGCGCGA GTTGATCGAC GGCCTGGTGG ATGACGGTTA CGACCCGGTC
GACCTGGCCT GCGCCATGGC CAGCATGGCG CGTTCCGGCG AAGCGCCCAT CGGTCGCTTG
CCCAAGCCCG GCGAACGCCG CTCGCGTCAG AGCAGCGGCC GCGACGACAA GCCCAACCGT
CGCGATCGCG GGCCCAGTGC CGGCATGACG CGTTATCGCG TGTCGGTGGG TCACAAGGAT
GGCGTCAAGC CCGGCCAGCT GGTCGGGGCG CTGGCCAACG AGGGTGGCAT CGACGGCGGC
AAGATCGGGC GGATCGACAT CCGCAACGCC TTCTCCGTGG TCGAGCTGCC GAATACGCTG
CCGGCAGCCG TCCTGTCGCG CATCGCGCAG GCACGCGTGG CGGGTCGTCC GCTGGAGATC
GCCGAGGACC ATGGTGCGCC GGAGCGCGCG CCCCGTCGGC GCCGTGAAGA CGGCGACAGC
ACGCCGCGCC GTCGCTCGCA GGCATAA
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| Protein sequence | MTTTPVASPT FAELSLPSTI LSTLETLGYE TPSLIQAKTI PALLEGRDVL GQAQTGTGKT
AAFALPLLSR LDLQRREPQV LVLAPTRELA QQVAASFVQY GRGVKGLEVL SLCGGQEYRE
QLSGLRRGAQ VIVGTPGRVI DHLDRGSLKL DGLNALVLDE ADEMLRMGFI DDVKRVVSDT
PKDAQRVFFS ATLPDEISRI VNHYLVDPLR IAIETKTKTA EGIEQRLVRI EGGAKLEALS
RLLEVEPVDA AIVFVRTRAA CTTLVEQLLL RGVNAAALSG DLDQSLRERT VERLKRGKVD
VLIATDVAAR GLDVPRITHV FNYDLPQDAE AYTHRIGRTG RAGRTGVAIT FAGGREQRRV
RDMERVTGQQ MQEVELPDED AIRAHRNELF RKRVLDTLAR GSDYQRELID GLVDDGYDPV
DLACAMASMA RSGEAPIGRL PKPGERRSRQ SSGRDDKPNR RDRGPSAGMT RYRVSVGHKD
GVKPGQLVGA LANEGGIDGG KIGRIDIRNA FSVVELPNTL PAAVLSRIAQ ARVAGRPLEI
AEDHGAPERA PRRRREDGDS TPRRRSQA
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