| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0980 |
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| Symbol | |
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| ID | 4026203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 1098809 |
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| End bp | 1100455 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637966157 |
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| Product | choline/carnitine/betaine transport |
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| Protein accession | YP_573036 |
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| Protein GI | 92113108 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAC GTTCGCAGGA CGATGCGGCC CAAGAGCCCA ATAACGGCTC CGAGGGCGTG
CCGGCCCCGG ATGGGCCGGC CAATCTGATC GATACCGATT ACGTCATTGG TCAGGACAAC
ATCACCTCGT CGAAGTTCGG CATCGACTTC GATCTACACG GCAAGGTGTT CACGATCTCG
TCACTGATGA TTCTGTTCTT CGTCATCGTG ACGCTGGCGT TTCAGAACCA GGTGGCACCG
ATCTTCAACG CCATGTTCTC GTTCTTGACG GGCAGCCTGG ACTGGTTCTT CATCCTGGCC
GCCAATATCT TCGTGGTACT GGCCGTCGCA CTGATTTTCA CGCCCATGGG AAAAGTCCGA
CTGGGTGGCG CTCACGCCAA GCCCGACTTC AGCTATGCTG GCTGGTTCGC CATGCTGTTC
GCGGCTGGGA TGGGCATCGG GCTGATGTTC TACGGTGTGG CCGAGCCGAT GACGCATTTC
GGAACCTCGT TCGAAGGCGG CTCGAGCGCC CCCCTGGGTG GCATGGCCGG CAACGAGCAA
GGCGCCATGC AACTTGGCAT GGCCGCGACG ATCTTCCACT GGGGCCTGCA TCCTTGGGGG
ATCTACGCCA TCGTCGCACT GTCCCTGGCG CTGTTCGCCT ATAACAAGGG CCTGCCACTG
ACCATGCGCT CGATTTTCTA TCCGATTCTC GGCGAGCGCG TCTGGGGATG GCCCGGCCAC
GTCATCGATA TCCTGGCGGT CTTCGCCACG CTGTTCGGTC TGGCAACGTC CCTGGGGCTC
GGCGCTTCAC AGGCCTCCGC CGGTCTGCAT TACCTGTTCG ATACGCCCAA CACCAACGTC
ACCATGGTGA TATTGATCCT GGGTATCACG CTGGTGGCGC TGATGTCCGT CGTGGCCGGT
GTCGACAAGG GGGTACAACG TCTGTCGCAG CTCAACATGG CGCTCGCCTT CCTGCTGCTC
GTCTTCGTGA TTTTCGTCGG CCCGACCCTG CTGATCGCCA CCGGTTTCTT CGAGAACCTG
TGGGGTTACG TCCAGAACCT TCCCGCCTTG TCCAATCCCT TCGGACGTGA AGATACCGGC
TTCACGCAAG GCTGGACGGC GTATTACTGG GCCTGGTGGA TTTCCTGGTC ACCGTTCGTC
GGGATGTTCA TCGCTCGCGT CAGCCGTGGC CGCACCGTGC GCGAGTTCCT GATCGCCGTG
CTCCTGGTGC CGACGCTGGT CTCGATCCTG TGGATGACCG CGTTCGGCGG CACTGCCATC
GACCAGTACA TCAACCAGGG CTTCGAAGGC GTCAAGGATG CCGCACTGGA GCTGCAGCTG
TTCACCATGC TCGGCCAACT GCCGCTGACC GCGATCACCT CGTTCGTGGG CATCGTGCTG
GTGATGGTGT TCTTCATCAC CTCCTCGGAC TCGGGCTCGT TGGTCATCGA CTCGATCACA
GCCGGCGGCA AGGTCGACGC TCCCAAGCCC CAGCGCATCT TCTGGGCCTT GATCGAGGGC
GCGATCGCCA TCGCCCTGCT GCTGGGCGGC GGCCTGACCG CACTGCAAAC CGCAGTGATC
ACCACCGGCC TTCCCTTCAC CCTGGTGCTC CTGGCGGGCT GCTACGCCAT CATCAAGGGC
TTGATGAGCG AACCACGCGG CACCTGA
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| Protein sequence | MEKRSQDDAA QEPNNGSEGV PAPDGPANLI DTDYVIGQDN ITSSKFGIDF DLHGKVFTIS
SLMILFFVIV TLAFQNQVAP IFNAMFSFLT GSLDWFFILA ANIFVVLAVA LIFTPMGKVR
LGGAHAKPDF SYAGWFAMLF AAGMGIGLMF YGVAEPMTHF GTSFEGGSSA PLGGMAGNEQ
GAMQLGMAAT IFHWGLHPWG IYAIVALSLA LFAYNKGLPL TMRSIFYPIL GERVWGWPGH
VIDILAVFAT LFGLATSLGL GASQASAGLH YLFDTPNTNV TMVILILGIT LVALMSVVAG
VDKGVQRLSQ LNMALAFLLL VFVIFVGPTL LIATGFFENL WGYVQNLPAL SNPFGREDTG
FTQGWTAYYW AWWISWSPFV GMFIARVSRG RTVREFLIAV LLVPTLVSIL WMTAFGGTAI
DQYINQGFEG VKDAALELQL FTMLGQLPLT AITSFVGIVL VMVFFITSSD SGSLVIDSIT
AGGKVDAPKP QRIFWALIEG AIAIALLLGG GLTALQTAVI TTGLPFTLVL LAGCYAIIKG
LMSEPRGT
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