| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0887 |
|---|
| Symbol | |
|---|
| ID | 4027793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1000553 |
|---|
| End bp | 1001338 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637966064 |
|---|
| Product | RNA methyltransferase TrmH, group 3 |
|---|
| Protein accession | YP_572943 |
|---|
| Protein GI | 92113015 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.986853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTA AGTCGTCCCG GACGCGCGTC GCGACGCCCG AAGGTCTGGA TGCCGTCTAC
GGCGTACATG CCGTGCGTGC CTTGTTCGAG CGTGGCCAGC CGCCGCGCGA GCTGTGGATC
CAGGAGGGGC GCGCCGAAGC GCGCCTGGAA GCGCTGGTGG CGCTGGCGCG GCAGGCGGGC
GTCAAGTGCG CCGGTGTGGC CCGCGAGACG CTCGATGGCG TGGCCAGAGG CGCCGTGCAT
CAGGGGGTGA TCGCCTTTGC GCCGCCGCTG CAGGCCGAAA GCGAGGAGGC GTTATGGTTT
CGCCTCGGCG CCTGGCAGCA ATCGTCGCCG CCCTTGCTGC TGATCCTCGA CGGGGTGACC
GACCCGCATA ATTTCGGTGC CTGTCTTCGC AGCGCGGATG CGGCGGGCGC GCATGGCGTC
ATCGTGCCCA AGGACAAGGC CGCGCCGCTC AATGCCACGG TCCGCAAGGT CGCCTGCGGT
GCCGCCGATG TCACGCCCGT CTATCAAGTC ACCAACCTGG CGCGGGCCAT GGGTCGGCTC
AAGACTCATG GGGTCTGGAT CGTGGGTACC GCCGGCGAAT CGGCGCAGTG CCTGTACGAC
ATCGATCTGG CCGGGCCGCT GGCAGTGGTC ATGGGCGCCG AGGGCAAGGG CATGCGCCGC
CTGACCCGCG ATGCCTGTGA CCTGCTCGCC AAGCTGCCCA TGGCCGGCAG CGTTTCCAGT
CTCAACGTGT CGGTTGCCAC CGGGGTCTGC CTGTTCGAGG CCGTTCGCCA GCGTCAGTCC
TCGTGA
|
|---|
| Protein sequence | MKGKSSRTRV ATPEGLDAVY GVHAVRALFE RGQPPRELWI QEGRAEARLE ALVALARQAG
VKCAGVARET LDGVARGAVH QGVIAFAPPL QAESEEALWF RLGAWQQSSP PLLLILDGVT
DPHNFGACLR SADAAGAHGV IVPKDKAAPL NATVRKVACG AADVTPVYQV TNLARAMGRL
KTHGVWIVGT AGESAQCLYD IDLAGPLAVV MGAEGKGMRR LTRDACDLLA KLPMAGSVSS
LNVSVATGVC LFEAVRQRQS S
|
|---|
| |