Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0883 |
Symbol | |
ID | 4027786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 994511 |
End bp | 996061 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637966057 |
Product | SpoVR family protein |
Protein accession | YP_572939 |
Protein GI | 92113011 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.800321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCCAT CCCCCATCGC TACCGGCTCC GACTGGAACT TCGAGATCCT GACGGCCTAC GAGCGTGAAA TCGCGCGTTT CGCCAAGGAA TATCGTCTGA ATACCTATCC CAACCAGATC GAGATCATCA CGTCCGAGCA GATGATGGAT GCCTATGCCA GCGTGGGCAT GCCGGTGGGC TACCATCACT GGTCGTTCGG CAAGCAGTTC CTGTCCGTCG AGCAGGCGTA TCGGCGTGGT CAGATGGGGC TGGCCTATGA GCTGGTCATC AATTCCGATC CCTGCATCGC CTACCTCATG GAAGAGAACA CCTTGATGAT GCAAGTGCTG GTCATGGCGC ACGCCTGCTA TGGCCATAAC TCGTTCTTCA AGGGGAACTA CCTGTTTCGC ACCTGGACGG ATGCCTCGGC GATCGTCGAT TACCTGGTGT TCGCGCGCAA ATACATTGCC GAGTGCGAGG AGCGTCACGG CGTCGGGGCG GTGGAGCAAC TGCTGGATGC CTGTCACGCC CTGCAGAACT ACGGCGTCGA TCGCTACAAG CGGCCCTCGC CGATCTCCTC CGAGGAAGAG GCACGTCGCC AGCAGGAGCG GGAAGCCTAC CTGCAGGCGC AAGTCAACGC CCTGTGGCGA ACCATCCCCG AGCAGGCGAC ACCGACCGCG CAGAGGCCGG ACGAGGATGG CGATGATCCG CTCGGGCTGC ACCAGCACGG CCGCTATCCC GCCGAACCTC AGGAAAACCT GCTGTACTTT CTGGAGAAGA ATGCTCCGCT GCTGGAGTCA TGGCAGCGCG AGGTGGTGCG GATCGTGCGC AAGCTGGCGC AGTATTTCTA CCCGCAGCGT CAGACCCAGG TCATGAACGA GGGGTGGGCC ACCTTCTGGC ACTATACGTT GATGAATCGC CTCTACGATG AAGGCTTGAT CGACGAGGGC ACGATTCTCG AATTCCTGCA CTCGCACACC GCGGTGATTC AGCAGCCGGG GTTCGACAGT CCCCATTTCA ACGGCATCAA TCCCTACGCG CTGGGGTTCG CCATGTTCTC GGACATCCGT CGGATCTGCG AGGCGCCGAC TGACGAGGAC CGCGAATGGT TCCCGGACAT CGCCGGCAGC GACTGGCTGG ATACGCTGCA TTTCGCGATG CGCAACTTCA AGGACGAGTC GTTCATTCAG CAGTTCCTGT CGCCCCGGGT GATCCGCGAC CTCAAGCTGT TCAGCCTCGT CGACGACGAT CGCGATGAGA TGCTCACCAT CAGTGCCATT CACGATGAAC GCGGCTATCG CCGCGTGCGC GAGGCCCTCT CGGCGCAGTA CGCGCTTTCC CTGCGCGAGC CCAACATCCA GGTCTGGGAA GCCGACATTC GTGGCGATCG GTCGCTGACG CTGCGCCATG TTCAGGACCG TCGGCGGCCG TTGGGCAAGA CGCTCTACCC GGTGTTGCGC CATCTGCATC AGCTGTGGGG ATTCCCCGTC AAGCTGGAGT CGGTCGAAGA CGACGAGGTC GTGCGCCACT ATCAATGGCC ACTGCCCGGC GACGAGCGCG AGGGGGCATG A
|
Protein sequence | MSPSPIATGS DWNFEILTAY EREIARFAKE YRLNTYPNQI EIITSEQMMD AYASVGMPVG YHHWSFGKQF LSVEQAYRRG QMGLAYELVI NSDPCIAYLM EENTLMMQVL VMAHACYGHN SFFKGNYLFR TWTDASAIVD YLVFARKYIA ECEERHGVGA VEQLLDACHA LQNYGVDRYK RPSPISSEEE ARRQQEREAY LQAQVNALWR TIPEQATPTA QRPDEDGDDP LGLHQHGRYP AEPQENLLYF LEKNAPLLES WQREVVRIVR KLAQYFYPQR QTQVMNEGWA TFWHYTLMNR LYDEGLIDEG TILEFLHSHT AVIQQPGFDS PHFNGINPYA LGFAMFSDIR RICEAPTDED REWFPDIAGS DWLDTLHFAM RNFKDESFIQ QFLSPRVIRD LKLFSLVDDD RDEMLTISAI HDERGYRRVR EALSAQYALS LREPNIQVWE ADIRGDRSLT LRHVQDRRRP LGKTLYPVLR HLHQLWGFPV KLESVEDDEV VRHYQWPLPG DEREGA
|
| |