| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0851 |
|---|
| Symbol | |
|---|
| ID | 4027414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 950903 |
|---|
| End bp | 951763 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637966017 |
|---|
| Product | ribosomal large subunit pseudouridine synthase B |
|---|
| Protein accession | YP_572907 |
|---|
| Protein GI | 92112979 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000682568 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGC CTACCGAGAA ATTACAGAAG GTCCTGGCCC GCGCGGGCTT CGGCTCGCGC
CGCGAGATGG AGACCGCCAT CGCCGATGGC CGCGTCAAGG TCAACGGTCA GGTCGCCACC
CTGGGCGATC GCATCGAGAC ACGCGACCGC GTCACCTTCG ACGAGCGGCC GGTCAATCTG
CGCGATGCCG AGGAAGTGCC CCGGCGCGTC ATCATGTACA ACAAGCCCGA AGGCGAGCTG
TGCACGCGAC GTGACCCCGA GGGTCGGCGT ACCGTGTTCG AGCGCCTGCC GCGTCTCAAG
GGCGAGCGCT GGATCGCCGT CGGTCGTCTC GACATCAACA CCAGCGGCCT GCTGCTGTTC
ACCACCGATG GCGAGCTCGC CAACCGCCTG ATGCATCCCG CCACGCAGGT CGAGCGCGAA
TACGCGGTGC GCGTGATGGG CAACGTTCGC CAGGAACACG TCAATGCCAT GGTCGAGGGC
GTGATGCTCG AGGATGGCCC GGCGCGTTTC ACCGATGTGC AGGAATTCGG CGGCGAGGGC
ATCAACACCT GGTTCCACGT GGTGATCCTT GAGGGACGCA ACCGCGAGGT ACGGCGTCTC
TGGGAATCTC AAGGACTCAC GGTGAGTCGT CTCAAGCGTG TGCGCTACGG CAACATCTTT
CTCGACAAGC GCGCCAAGGC CGGCGAATGG GTCGAGCTGT CGCAGGATGA GATCGACGAC
CTGGCGCAGC TGGCGGACCT GCCAGCGCGC AAGGTGCCCG AACTGACGCC CGACGAGCAG
AATCGCTGGA GCCGTGACAA GAACAAGCGC CGTCCGGTCA ATGCCATGCG CAAGCCGAAG
TCGTCGCGGC GCTCGCGGTG A
|
|---|
| Protein sequence | MNTPTEKLQK VLARAGFGSR REMETAIADG RVKVNGQVAT LGDRIETRDR VTFDERPVNL
RDAEEVPRRV IMYNKPEGEL CTRRDPEGRR TVFERLPRLK GERWIAVGRL DINTSGLLLF
TTDGELANRL MHPATQVERE YAVRVMGNVR QEHVNAMVEG VMLEDGPARF TDVQEFGGEG
INTWFHVVIL EGRNREVRRL WESQGLTVSR LKRVRYGNIF LDKRAKAGEW VELSQDEIDD
LAQLADLPAR KVPELTPDEQ NRWSRDKNKR RPVNAMRKPK SSRRSR
|
|---|
| |