| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0778 |
|---|
| Symbol | |
|---|
| ID | 4026081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 870672 |
|---|
| End bp | 871961 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637965944 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_572834 |
|---|
| Protein GI | 92112906 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0594018 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC AACGCTGTGC TTCCTATTAC ACCGCATCGA TCGTCCAGGA ATCCGACTAT
CCGCGACTGG AAGGTGAGCA TCGTGTCGAC GTGGCGATCG TCGGCGGCGG CTTCACCGGC
GTGGCCACGG CGGTCGAGCT GGCCGAGCGC GGCTATCGCG TGGCCATCGT CGAGGCCAAC
CGGATCGGCT GGGGGGCCAG CGGACGCAAC GGCGGGCAGG TGACCGGCAG TCTCTCCGGC
CAGGACGCCA TGGCCCGAGA AATGCGCCGC ACGCTGGGCG ACGACGCCGA AAGCTTCGTC
TGGAACCTGC GCTGGCGCGG GCATCGGATC ATCAAGCAGC GGGTCGAAAA GTATGCGATC
CCCTGCGACC TCAAGCACGG CCACCTGCAG GCGGCCTACA AGCCCAGCCA CATCAAGGCG
TTGCGACAGG ATTTCGAGGC GTCGCAGCAC CATGCCATCG GCGAGCATGT GCACTGGCTG
GATGCCAAGG CGGTGCGCGA GGTGGTCGGT ACCGAGCTCT ATCACGGGGC GATCCGCAAC
GATTACAACA TGCACCTGCA CCCGCTCAAC CTGTGCCTCG GGGAGGCCCG CGCGGCAGCA
AGCCTGGGGA CGCGGATCTT CGAGAATTCG CCGGTGGTGG ATATCGAGCA CGGCGATACG
CCGGTGGTGG TCGGCGAGCA CGGCCGGGTG ACAGCCGACA GCGTGATCCT GGCCGGCAAC
GCCTATCACC GCCTCGAGCG CAAGCAGCTG AAGGGCAAGT TGTTTCCGGC ATCGCTGGGC
ATCGTCACGA CGGCGCCGCT ATCGCCCGAA CAGGTGCAGT CCATCGACCC CGAGGATCTT
GCGGTCTATG ACACGCGTTT CGTACTCGAC TACTACCGAC TGACCGCCGA CAAGCGGCTT
CTCTTCGGTG GCGGCGCCAA CTACTCGGGG CGCGATTCAC AAGACATCGC CTCGGAGTTG
CGGCCGCGCC TGGAGCACAC CTTCCCGCAG CTCGAGGGCA TTGCCATCGA TTTTCAATGG
CAGGGCATGG CAGGCATCGT CATCAACCGC ATTCCCCAGC TCGGCAAGCT CTCGGACAAC
GTCTACTACG CCCAGGGCTA CTCTGGCCAC GGCATCGCCA CCTCGCACAT CGTCGGCGAG
ATCATGGCCA ATGCGGTTTC CGGCACGCTA GAGGAGTTCG ATGCCTTCGC CAACGTGCGG
CACATCCGCA TCCCGCTCGA CGACCGGCTC GGCAATGCAC TGCTCGCGGC CGGCATGTGG
TACTACCAAC TGCTCGAAAA ACTCAAATAG
|
|---|
| Protein sequence | MTQQRCASYY TASIVQESDY PRLEGEHRVD VAIVGGGFTG VATAVELAER GYRVAIVEAN
RIGWGASGRN GGQVTGSLSG QDAMAREMRR TLGDDAESFV WNLRWRGHRI IKQRVEKYAI
PCDLKHGHLQ AAYKPSHIKA LRQDFEASQH HAIGEHVHWL DAKAVREVVG TELYHGAIRN
DYNMHLHPLN LCLGEARAAA SLGTRIFENS PVVDIEHGDT PVVVGEHGRV TADSVILAGN
AYHRLERKQL KGKLFPASLG IVTTAPLSPE QVQSIDPEDL AVYDTRFVLD YYRLTADKRL
LFGGGANYSG RDSQDIASEL RPRLEHTFPQ LEGIAIDFQW QGMAGIVINR IPQLGKLSDN
VYYAQGYSGH GIATSHIVGE IMANAVSGTL EEFDAFANVR HIRIPLDDRL GNALLAAGMW
YYQLLEKLK
|
|---|
| |