Gene Csal_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0704 
Symbol 
ID4026712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp791424 
End bp793523 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content73% 
IMG OID637965874 
Producthypothetical protein 
Protein accessionYP_572764 
Protein GI92112836 
COG category[E] Amino acid transport and metabolism
[S] Function unknown 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCCG TTTCGCGTCC CCTGCCGCCG TTGACCGCCC TCGCGCCGCC CGAGCTGGAA 
TGGCGTGCCG ACGACATCAG CGACGCGCCC TACGCCAGCG CGTATGGCGA TGTGTATTTC
TCGCGCCACG ACGGCCGCGC CGAGACCGGT CACGTCTTCG TGGAGGGCAA CCGCCTGCCC
GAGCGTTTCG CCGCCTGGCG CGAGACACGG GCGTTCGTGA TCGGCGAAAC CGGCTTCGGC
ACCGGCCTCA ACATGCTGTG TGCCTGGGCG TGCTTCGAGC GCCACGCGCC CGCCGAGGCC
CGTCTGCACC TGGTATCCAC CGAGAAATAT CCCTTGCCGC GCGACGCCCT GGCGCGTGCG
CTGGCGATCT GGCCGGACAT GGCCGCCCGT GCCGGCGTCC TGCTCGACCA GTGGCCCGAG
CCGGTCGGCG GCGTGCATCG GCTGTGGCTG TCGTCACGCG TGGTGCTGGA CCTGCACTTC
GGCGATGCCG CCGAGCGCCT GTCGCGTCTC GATGGCCGTG TCGACGCCTG GTTTCTGGAT
GGTTTCTCGC CGGCCAAGAA CCCCGACATG TGGCAGCCCG AGCTGTTCGC GGCGATGGCC
CAGGTCAGCC GCCCCGGCGC CACCTTCGCT ACCTTCACCT GCGCCGGCGT GGTCAAGCGC
GGGCTGCGCG ATGCGGGCTT CACCTGGCGC AAGACGCCCG GCTTCGGCCG CAAGCGCGAG
ATGCTGTGCG GCGAAATCGC CGCGCCGCCG GATGACAGGC GACGCGCCTC CACGCCCTGG
TTCACGCCGC CGCGCGCCCG CCCCGCCCGG CACGTGGTGG TCATCGGGGC GGGGCTCGCC
GGCACCAGTG TGGCCGCCGC CCTGGCCCGC CGCGGGGTCG CGGTCACGCT GCTCGAGCGC
GACGCCCCCG GCGCGGGCGC TTCCGGCAAC CGCCAGGGCG CGCTCTACGT CAAGCTCGCC
GCCGAGACCA ATCCGCAGAG CCGTGTCTAT CTCGCCGGCC TGCTGTACAC GCGGCGCTGG
CTGACCGCCC TCGACCCCGA GCAGCGCCTG TGGCAGGACT GCGGCGTGCT GCAGCTGGCA
CCCGGCGACA AGGAAGCCAC CCGCCAGCAG CGCTTCCTGG CCCATCACGC CCTGCCCGAG
CGCGTGCTGC ACGGCGTGGA CGCCGCCACC GCGAGCCAGG CCGCCGGCAC ACCGCTCGAC
GCGCCAGGGC TCGACTATCC CCAGGCCGGG TGGGTGCGTC CCGACCGGTT GTGTCAGCAA
CTGGCCGCAA GCCCCGGCAT CACCCAGCGG CGCGGCGAGG CGCACGATCT GGACTTCGAT
GCCGACGCCG ATGCCTGGCG CATCGCGCTG ACCGATGGCA GCACGCTCAC GGCCGATCAT
GTGGTCGTCG CCACCGCCCA CGAGGCACCG CGCTTCACGC CTCTGGCCGG CCTGCCGCTC
AAGCCGATTC GCGGTCAGCT CACCCACGTG CCGGTGCCCG CCGATGCGCC GTCATTGGCA
CGCGTGGTCT GCGCGGGCGG ATATGTCGCC CCGGCGATGG AGGGCGTGCT CAGCCTCGGC
GCGACCTTCG CCCCCGGCGA TACCGACACC GCCGTGCGCA CGACGGATCA TGCGCGCAAC
CTGGACGAAT TCACCGCCAC TCTGCCCGCC TTCGCCGAGG CGCTGCGCGC GGCCGGCGTC
ACGCTCGACC CGGCCGCCTG CGAGGGCCGT GCCAGCCTGC GCGCCGCCAG CCCCGACAAG
TCGCCCTATG CCGGGCCGGT GCCCGTGCGC GAGGCCTGGC TCGACGACTA CGCCGTGCTC
GGGGCCGATG CCCGCCGTGT GCCGTCCACC GCCGGCCGTC ATCACCCCGG CCTGTGGGTC
AGTGCCGCGC ATGGCTCGCG GGGGCTGGCC AGCGCGCCGC TGTGCGCCGA GGTCATCGCC
TCCCGCCTGT GCGACGAGCC CCTGCCGCTG GAACGCGAGC TGATCGACCA TCTCCATCCC
GGTCGACGTC TCATCGCCGA TATCATTCGC GGAAACGCGA CCCGCGGAAA CGCTACACTA
TCGACGTCAT CGCCGAACGA TGACGCCCAG CCGTCACCGA CCACCACCGA GACGCCATGA
 
Protein sequence
MPAVSRPLPP LTALAPPELE WRADDISDAP YASAYGDVYF SRHDGRAETG HVFVEGNRLP 
ERFAAWRETR AFVIGETGFG TGLNMLCAWA CFERHAPAEA RLHLVSTEKY PLPRDALARA
LAIWPDMAAR AGVLLDQWPE PVGGVHRLWL SSRVVLDLHF GDAAERLSRL DGRVDAWFLD
GFSPAKNPDM WQPELFAAMA QVSRPGATFA TFTCAGVVKR GLRDAGFTWR KTPGFGRKRE
MLCGEIAAPP DDRRRASTPW FTPPRARPAR HVVVIGAGLA GTSVAAALAR RGVAVTLLER
DAPGAGASGN RQGALYVKLA AETNPQSRVY LAGLLYTRRW LTALDPEQRL WQDCGVLQLA
PGDKEATRQQ RFLAHHALPE RVLHGVDAAT ASQAAGTPLD APGLDYPQAG WVRPDRLCQQ
LAASPGITQR RGEAHDLDFD ADADAWRIAL TDGSTLTADH VVVATAHEAP RFTPLAGLPL
KPIRGQLTHV PVPADAPSLA RVVCAGGYVA PAMEGVLSLG ATFAPGDTDT AVRTTDHARN
LDEFTATLPA FAEALRAAGV TLDPAACEGR ASLRAASPDK SPYAGPVPVR EAWLDDYAVL
GADARRVPST AGRHHPGLWV SAAHGSRGLA SAPLCAEVIA SRLCDEPLPL ERELIDHLHP
GRRLIADIIR GNATRGNATL STSSPNDDAQ PSPTTTETP