Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0654 |
Symbol | |
ID | 4026339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 732371 |
End bp | 734005 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637965824 |
Product | choline/carnitine/betaine transport |
Protein accession | YP_572714 |
Protein GI | 92112786 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAACA ATGGAAGGCA ACGCGTATTT ATCGTCTCCG CCTTGATCGT CGCGGTTCTC GTCGCCATCG GGGCGGCGTT TCCCGAGCGT TTCGGCAGCG CGGCGTCGTC GGCATTATCC GGCATTTCGC ACTATTTCGG GTGGTTCTAC CTGTTTTCGG TGTTCGGGTT CGTGGTGTTC TTGCTGACGC TGGCGTGCAG CAAGTATGGC AAGATTCGGC TCGGCCCCCA GGACAGTTCG CCCTCCTACA GTTTCTTCTC GTGGGTCAGC ATGCTGCTGG CGGCGGGGTT CGGCGTCGGC CTGGTGTTCT ACGGCATGGC CGAGCCGATG ACGCACTTCC TCGAACCGCC CTACGGTGAT GTGGAAGGCG GTACCGAAGA GGCGGCACGC TATGCCATCC AATACAGCTT CTTCAACTGG GGCATTCATC AGTGGGCCGC GTTTTCCGTG GTGGGGCTGA TCATTGCCTA TTATCAGTTC CGCAAGGGCC AGGCGGGGCT GGTCTCCAAC GTGCTTTCGA GCATGACCGC CAAGCGTCCC AAGATGCGCA AGCTGGGACC GGCGCTGGAT GTCTTTGCCG TGGTCGCGAC GGTGATGGGG GTGGCGACCT CCATCGGTCT GGCGGTGCTG CAGATCAACG GCGGCCTGCA TGCGGTCTTC GGTGTCGAAG AGGGCATGAC GTGGCAGTTC ATCATCATGG GGGCGATGTT TTTGTGTTAC ATGGCCTCCA CCTGGTCGGG GCTGGACAAG GGCATCAAGC GCCTTTCCAA CCTCAACATG GCGCTGTGCT TCGCGTTGAT GTTCTACGTG CTGTTCACGG GCCCCACCGT GGCCATTCTC GAGACCATCA CCCTGGGGAT CGGCGATTAC CTGCAGAACA TCGTGGGCAT GAGCCTGCGG GTCGCGCCGT ATAGCGACAA CACCTGGGCC AGCAACTGGA CGATCTTCTA TTGGGCCTGG GTCATCGCCT GGTCGCCGTT CGTGGGCACC TTCGTGGCGC GCGTCTCGCG TGGGCGCACC ATCAAGGAGT ACGTGTTCGG CGTGTTGATC GTGCCGCCGC TGCTGGCCTG CCTGTGGATC GGGGTCTTCG GCGGCGCGGC GCTCAACATG GAGCTCACCG GCGACGTGGG ACTGGCCTCG GCCACGGCAG ACAACATCAC GGTGGCGCTG TTCCGGATGT TCGAGCTGAT GCCGTTCTCC AATGTGCTGT CGGTGGTGGC GCTGTCGCTG ATCTTCATTT TCCTGGTGAC CTCGGCGGAC TCGGCGACCT ATATCGTGTC GCAGATGACC GATGGCGGTT CGCTGAATCC GCCGCTGTTC AAGCGGGTGA TCTGGGGGGT ACTGATCGCG GCGATCTGTC TGACCCTGCT GATTGCCGGC GGGTTGAATG GCCTGCAATC GGCGGCGGTG CTGGCGGCGT TACCCTTCAC CTTCATCCTG TACGGCATGA TTGCCGTGCT GGTGAAGGAA TTGCGCGCCG ATCGCAAGGC GATGCTGACA TCGCTTTATC ATCGTCATGG GGAAACGCCG GTAGGCGCCG ATGCCTTCGA GGCGGAAACG CTGGCGGAAG CCGAGCGGTA CCGGCGTGCA CCGAACGTGG TCAACCGGCG CATCAATACG CGCGACGGTA CCTGA
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Protein sequence | MANNGRQRVF IVSALIVAVL VAIGAAFPER FGSAASSALS GISHYFGWFY LFSVFGFVVF LLTLACSKYG KIRLGPQDSS PSYSFFSWVS MLLAAGFGVG LVFYGMAEPM THFLEPPYGD VEGGTEEAAR YAIQYSFFNW GIHQWAAFSV VGLIIAYYQF RKGQAGLVSN VLSSMTAKRP KMRKLGPALD VFAVVATVMG VATSIGLAVL QINGGLHAVF GVEEGMTWQF IIMGAMFLCY MASTWSGLDK GIKRLSNLNM ALCFALMFYV LFTGPTVAIL ETITLGIGDY LQNIVGMSLR VAPYSDNTWA SNWTIFYWAW VIAWSPFVGT FVARVSRGRT IKEYVFGVLI VPPLLACLWI GVFGGAALNM ELTGDVGLAS ATADNITVAL FRMFELMPFS NVLSVVALSL IFIFLVTSAD SATYIVSQMT DGGSLNPPLF KRVIWGVLIA AICLTLLIAG GLNGLQSAAV LAALPFTFIL YGMIAVLVKE LRADRKAMLT SLYHRHGETP VGADAFEAET LAEAERYRRA PNVVNRRINT RDGT
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