Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0599 |
Symbol | hslU |
ID | 4026258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 665082 |
End bp | 666407 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637965767 |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_572660 |
Protein GI | 92112732 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0711171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAGA TGACTCCCCG CGAGATCGTC CACGCACTGG ACCAGTACAT CATCGGCCAG CAGGAAGCCA AGCGCTCCGT TGCCATCGCC CTGCGCAACC GCTGGCGCCG CATGCAACTC GACGACTCGC TGCGCGGCGA GGTCGTCCCC AAGAACATCC TGATGATCGG TCCGACCGGG GTGGGCAAGA CCGAGATCGC CCGGCGTCTC GCCAAGCTGG CCGGCGCTCC CTTCATCAAG GTCGAGGCGA CCAAGTTCAC CGAGGTCGGC TATGTCGGCC GCGACGTCGA ATCGATCATC CGCGACCTGG TCGAGATGGC CATGAAGATG GTGCGCGAAC AGGCCAAGGA GGAAGTCGCT CACAAGGCCG AGGACGCCAC CGAGGAGCGC ATTCTGGATG CGCTCCTGCC GCGTCCGCGC GGCAGCGAAT ACGATCATGC CCGTGACGAG TCCTCGACGC GCCAGACCTT CCGCAAGAAG CTCCGCGAAG GGCAGCTCGA CGACAAGGAA ATCGACATCG AGATCACGCC GCAAGGCGGC GGTTTCGACA TTTCCGCGCC CCCGGGCATG GAGGAAATGA CCAGCCAGCT GCAGAGCATG TTCTCCAACA TGGGCAAGCA GAAGTCGGAG ACGCGTCGCG TCACCGTCGA GGAAGCCCGG CGCCTGCTCC ACGACGAGGA AGCCGCCAAG CTGGTCAACG AAGAGCAGAT CAAGCACCGC GCCATCGAGG CGGTCGAGCA GAACGGCATC GTCTTCCTCG ACGAGATCGA CAAGGTCGCC AAGCGCGGTG ATTCCGGCAG TGGCGGCGAC GTCTCCCGCG AAGGCGTGCA GCGCGACCTG CTGCCCCTGA TCGAGGGCTC GACGGTGTCC ACCAAGCACG GCATGGTCAA GACCGACCAT ATCCTGTTCA TCGCCTCGGG GGCGTTCCAC CTCTCCAAGC CGTCGGACCT GATTCCGGAG CTGCAGGGGC GTCTCCCGAT CCGGGTCGAA CTGCAGGCGC TGACGCCGGA TGACTTCAAG CGCATCCTCA CCGAGCCGTC CGCCGCGCTG ACCAAGCAGT ATCAGGCGCT GCTGGCCACC GATGGCCTGG AAGTGAACTT CACCGACGAG GGCATCGCGC GCATCGCCGA GATCGCCTGG CAGGTCAACG ACGGCACCGA GAACATCGGC GCCCGTCGCC TGCACACGGT CATGGAGCGC CTGCTCGAGG AACCTTCCTT CCAGGGAGGT GACATGGCGA GCCCGCTGAC CATCGACGCC GCCTATGTCG ACGAGCAGCT CGGCGAACTG GCCACCGACG AAGATCTGTC CCGCTACATT CTCTAG
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Protein sequence | MTQMTPREIV HALDQYIIGQ QEAKRSVAIA LRNRWRRMQL DDSLRGEVVP KNILMIGPTG VGKTEIARRL AKLAGAPFIK VEATKFTEVG YVGRDVESII RDLVEMAMKM VREQAKEEVA HKAEDATEER ILDALLPRPR GSEYDHARDE SSTRQTFRKK LREGQLDDKE IDIEITPQGG GFDISAPPGM EEMTSQLQSM FSNMGKQKSE TRRVTVEEAR RLLHDEEAAK LVNEEQIKHR AIEAVEQNGI VFLDEIDKVA KRGDSGSGGD VSREGVQRDL LPLIEGSTVS TKHGMVKTDH ILFIASGAFH LSKPSDLIPE LQGRLPIRVE LQALTPDDFK RILTEPSAAL TKQYQALLAT DGLEVNFTDE GIARIAEIAW QVNDGTENIG ARRLHTVMER LLEEPSFQGG DMASPLTIDA AYVDEQLGEL ATDEDLSRYI L
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