| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0585 |
|---|
| Symbol | |
|---|
| ID | 4026322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 650129 |
|---|
| End bp | 651697 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637965753 |
|---|
| Product | 3-octaprenyl-4hydroxybenzoate decarboxylase |
|---|
| Protein accession | YP_572646 |
|---|
| Protein GI | 92112718 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.168345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATGCT GCCCTTTTTC GCGTTCTGGC ACGGAAAACC ACATGAAGTA TCGGGACTTG
CGCGATTTCA TCGCGGCGCT GGAAGCACGT GGCGAGCTCA CGCGGGTGAC GGCGGAGGTC
GATCCCTACC TGGAGATCAC CGAAATCTGC GACCGCACCC TGCGGGCCGG GGGGCCGGCG
TTGCTGTTCG AGAACGTCAA GGGCCACGCC ATGCCGTTGC TGGGCAACCT GTTCGGCACG
CCGGAGCGGG TCGCGCTGGG CATGGGCCAG GACTCGACCG CCGCGCTGCG CGAGGTCGGC
GAGCTGCTGG CGTTTCTCAA GGAGCCGGAG CCGCCCAAGG GCTTTCGCGA TGCCTGGGAA
AAGCTGCCGA TCTTCAAGCA GGCGATGAGC ATGGGGCCCA AGACGCTGCG CAAGGCGCCC
TGTCAGGAAG TGATCCTGGA AGGCGACGAC GTCGACCTCG ACCGCCTGCC GATCCAGCAT
TGCTGGCCGG GCGACGTGGC GCCGCTGGTG ACCTGGTCGC TGGTGGTGAC CAAAGGGCCG
AACAAGACGC GCCAGAACCT GGGGATATAC CGCCAGCAGA AGCTGGGCAA GAACCGCCTG
ATCATGCGCT GGCTCTCGCA CCGCGGCGGC GCGCTCGACT TCCAGGAATG GCAGAGTGCG
CATCCCGGCG AGCCGTTTCC GGTCGCCGTC GCACTGGGCG CCGATCCGGC GACCATCCTG
GGCGCGGTGA CGCCGGTACC CGACAACCTC TCCGAGTACG CGTTCGCGGG GCTGCTGCGC
GGATCACGCA CCGAGCTGGT CAAGTGCGGG CATGCCGATC TCGAGGTGCC GGCGTCCAGC
GAGATCGTCC TCGAGGGCTA CATCTACCCT GATGACACCG CTCCCGAAGG CCCCTACGGC
GACCATACCG GCTATTACAA CGAGGTCGAG ACCTTCCCGG TGTTCACTGT CGAGCGGATC
ACCCATCGCC GCGATCCGAT CTATCATTCG ACCTATACCG GGCGTCCGCC GGACGAGCCC
GCCATTCTGG GGTTGGCGCT CAACGAAGTG TTCGTGCCGA TCCTGCGCAA GCAATTCCCC
GAAATCGTCG ATTTCTACCT GCCCCCGGAA GGCTGCTCCT ATCGCATGGC GGTGGTGACC
ATGAAAAAGC AGTATCCGGG GCACGCCAAG CGCGTGATGA TGGGCGTATG GAGCTTCCTG
CGCCAGTTCA TGTACACCAA GTTCGTGATC GTCCTCGACG ACGATGTCGA CGCGCGCAAC
TGGGAGGACG TGATCTGGGC GATCACGACC CGCATGGACC CGGCACGCGA CACGGTGATG
GTCGAAAACA CCCCCATCGA TTATCTCGAC TTCGCCTCGC CGACCGCGGG GCTGGGCTCG
AAGATGGGGC TCGACGCGAC GACCAAATGG GCGGGCGAGA CCCAGCGCGA GTGGGGGACC
CCCATCGTCA TGGACGAGGC CGTCAAGCGG CGCGTCGATG AGCGCTGGGG GGAATACGGC
ATCGCCACGC CGCCACCGCC ACCCCGCCAT TCGCCCCCGA GCGACGAACG AGGACACGAT
GACGTCTAA
|
|---|
| Protein sequence | MLCCPFSRSG TENHMKYRDL RDFIAALEAR GELTRVTAEV DPYLEITEIC DRTLRAGGPA
LLFENVKGHA MPLLGNLFGT PERVALGMGQ DSTAALREVG ELLAFLKEPE PPKGFRDAWE
KLPIFKQAMS MGPKTLRKAP CQEVILEGDD VDLDRLPIQH CWPGDVAPLV TWSLVVTKGP
NKTRQNLGIY RQQKLGKNRL IMRWLSHRGG ALDFQEWQSA HPGEPFPVAV ALGADPATIL
GAVTPVPDNL SEYAFAGLLR GSRTELVKCG HADLEVPASS EIVLEGYIYP DDTAPEGPYG
DHTGYYNEVE TFPVFTVERI THRRDPIYHS TYTGRPPDEP AILGLALNEV FVPILRKQFP
EIVDFYLPPE GCSYRMAVVT MKKQYPGHAK RVMMGVWSFL RQFMYTKFVI VLDDDVDARN
WEDVIWAITT RMDPARDTVM VENTPIDYLD FASPTAGLGS KMGLDATTKW AGETQREWGT
PIVMDEAVKR RVDERWGEYG IATPPPPPRH SPPSDERGHD DV
|
|---|
| |