Gene Csal_0584 details

Gene Information

• Locus tag: Csal_0584
• Symbol: rho
• ID: 4026321
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 648610
• End bp: 649869
• Gene Length: 1260 bp
• Protein Length: 419 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637965752
• Product: transcription termination factor Rho
• Protein accession: YP_572645
• Protein GI: 92112717
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.290432
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCTTA CCGAACTCAA GCAAAAAACC GTTCCCGAAC TGCTGGATAT TGCCCGGGAA 
ATGGGCATCG ACAATCTGGC GCGTTCGCGT AAACAAGACA TCATCTTTGC CATTCTCAAG 
AAGCACGCGA AAAGTGGCGA AGATATCTAT GGCGATGGGG TGCTGGAAAT CCTGCAGGAC 
GGCTTCGGCT TTCTGCGCAG TGCCGATAGC TCCTATCTGG CCGGCCCCGA CGATATCTAT 
GTCTCGCCGT CGCAGATTCG CCGTTTCAAC CTGCGCAAGG GCGACAGCAT CGCCGGCAAG 
ATCCGGCCGC CGAAGGAAGG GGAGCGCTAT TTCGCGCTGC TCAAGGTCAA CGAGATCAAC 
TTCGATCGGC CGGAAAACGC CAAGCACAAG ATCCTGTTCG AGAACCTGAC GCCGCTGTTC 
CCTCAGGAAC GCATGGTGAT GGAGATCGGC AACGGTTCGA CCGAGGATCT GACCTCGCGG 
GTGATCGACC TCACATCGCC CATCGGCAAG GGCCAGCGTG GCCTGATCGT CTCGCCCCCC 
AAGGCGGGCA AGACGCTGAT GCTGCAGAAC ATCGCCACGT CCATCACGCG CAACAACCCC 
GAGTGTCACC TGATCGTGCT GCTGATCGAC GAGCGGCCCG AGGAGGTCAC CGAGATGTCG 
CGCACCGTGC GTGGCGAAGT GGTGGCCTCG ACCTTCGACG AGCCGCCCGC GCGTCACGTT 
CAGGTCGCCG AGATGGTCAT CGAGAAAGCC AAGCGCCTGG TCGAGCACAA GCGCGACGTG 
GTGGTGCTGC TCGATTCCAT CACGCGCCTG GCGCGCGCCT ACAACACCGT GGTGCCGTCG 
TCCGGCAAGG TGCTGACCGG CGGTGTCGAC GCGCATGCGC TCGAGAAGCC CAAGCGTTTC 
TTCGGGGCCG CGCGCAACAT CGAGGAAGGC GGCAGCCTGA CCATCATCGC CACGGCGCTG 
GTGGACACCG GTTCCAAGAT GGACGAGGTC ATCTTCGAGG AGTTCAAGGG GACCGGCAAC 
ATGGAAGCGC ACCTCGACCG CAAGCTGGCC GAGAAGCGCG TCTATCCGGC GCTCAACATC 
CGCCGCTCCG GCACGCGTCG CGAGGACCTC ATCGCCTCCG AGGAAGAAAT GCAGCGCATG 
TGGATCCTGC GCAAGCTGCT CAATCCGATG GACGACGTGG CGGCGACGGA GTTTCTGATC 
GATCGTCTGA AGGATACCAA GACGAATATC GAATTCTTCG AGGCCATGAA AAGGCGTTGA 

 

Protein sequence

MNLTELKQKT VPELLDIARE MGIDNLARSR KQDIIFAILK KHAKSGEDIY GDGVLEILQD 
GFGFLRSADS SYLAGPDDIY VSPSQIRRFN LRKGDSIAGK IRPPKEGERY FALLKVNEIN 
FDRPENAKHK ILFENLTPLF PQERMVMEIG NGSTEDLTSR VIDLTSPIGK GQRGLIVSPP 
KAGKTLMLQN IATSITRNNP ECHLIVLLID ERPEEVTEMS RTVRGEVVAS TFDEPPARHV 
QVAEMVIEKA KRLVEHKRDV VVLLDSITRL ARAYNTVVPS SGKVLTGGVD AHALEKPKRF 
FGAARNIEEG GSLTIIATAL VDTGSKMDEV IFEEFKGTGN MEAHLDRKLA EKRVYPALNI 
RRSGTRREDL IASEEEMQRM WILRKLLNPM DDVAATEFLI DRLKDTKTNI EFFEAMKRR