Gene Csal_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0578 
SymboldnaE 
ID4026315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp640374 
End bp643880 
Gene Length3507 bp 
Protein Length1168 aa 
Translation table11 
GC content66% 
IMG OID637965746 
ProductDNA polymerase III subunit alpha 
Protein accessionYP_572639 
Protein GI92112711 
COG category[L] Replication, recombination and repair 
COG ID[COG0587] DNA polymerase III, alpha subunit 
TIGRFAM ID[TIGR00594] DNA-directed DNA polymerase III (polc) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACGC CTTTCGTACA CCTGCGCGTC CACACCGAAT ATTCCCTGGT CGATGGCCTG 
GTACGCTTGA AGCCGTTGAT CGAAGCGACG GTCGAGGGCG GCATGCCGGC CGTGGCCGTG
ACCGACGATT CCAATCTGTT CGGCCTGGTC AAGACCTACA AGGCGGCGCA AGGAGCGGGG
CTCAAGCCGG TCATCGGGGC CGACCTGTGG ATGGAAAACC CCCATGACGA AGAGCACCCC
TACCGGGTCA CGCTGCTGGC GATGGACAAC GACGGCTACC GTCACCTGAC CGAACTGATC
TCGCAAGGCT GGAGCGAAGG TCAGCAGCGC GGCCAGGGCA TCCTCAAGAA GGAATGGATC
TTTGCCCGCA GCGCGGGCCT GATCGCGCTT TCCGGGGCCC GCGACGGCGA GATCGGCCGT
TACCTGCTAT CCGAGCACGG TCAGGCCGCG CGCGAGCTGT GCGAGGGCTG GAAGGCCGCC
TTTCCGGGGC GCTTCTATCT GGAAGTCCAG CGTACCGGCC GCGAGCACGA CGAGGAGTGC
CTGCATCTGT CGGTGGCCCT GGCGGCCGAG ACCGAGACGC CGGTGGTGGC GACCAACGAC
GTGCGCTTCC TGACCCGTGA GGACTACTGG GCCCACGAGA CGCGGGTGGC GATCGGCGAG
GGCAAGGCGC TCGACGACCC CAGGCGCGAG CGCCGCTACA GCGAAGAGCA GTACCTGAAG
AGTCCGCAGG AGATGGCGGA GCTGTTCTCG GACCTGCCCG AGGCACTGGA AAACAGCGTG
ATGATCGCCG CGCGCTGCAA CGTCGACGTG CCGCTGGGAG AAATCTTCCT GCCCGAGTAC
CCGGTGCCGG ACGGCATGAG CATGGACGGC TTCTTCCGCA AGATTTCCCA TGACGGCCTG
ACCGAGCGGC TCGACAAGCT GTTCTCCGGC GAGAACCCGA TCTACCCCGG CCGCGACCTC
GCCGAGTACG AACCGGCCTA CCGCGAGCGT CTCGACTTCG AGCTCAACAT CATCCTCGAG
ATGGGCTTCC CCGGGTACTT CCTGATCGTC ATGGACTTCA TCCAGTGGGC CAAGGACAAC
GACATTCCGG TGGGCCCGGG GCGCGGGTCC GGGGCGGGGT CGCTGGTCGC CTATGCGCTC
AAGATCACCG ACCTCGACCC GCTGGAATAC GACCTGCTGT TCGAGCGCTT CCTCAACCCC
GAGCGCGTGT CGATGCCCGA CTTCGACGTC GACTTCTGCA TGGAAAAGCG CGACCGGGTC
ATCGAGTACG TGGCGAGTCG CTACGGCCGC GATGCCGTCT CGCAGATCGT CACCTTCGGC
ACCATGGCCG CCAAGGCCGT GGTCCGCGAC GTGGCGCGCG CCCAGGGCAA ACCGTACTCG
ATGGGCGACA AGCTCTCCAA GCTGATCCCC TTCGAGGTCG GCATGACCCT GGCCAAGGCC
ATCGAGCAGG AGCCGGCGCT CAAGGAATAC CTGGACAGCG ACGAGGAGTC CCAGGAAATC
TGGGACATGG CGCTCAAGCT CGAGGGCATC ACGCGCGGGA CCGGCAAGCA CGCCGGCGGG
GTGGTGATCG CGCCCACCAA GCTCACCGAT TTCTCGCCGC TGCTGTGCGA TGAGGACGGC
AGCGGCCTGG TCGTCCAGTA CGACAAGAAC GACATCGAGG AAGCCGGGCT GGTCAAGTTC
GACTTTCTGG GGCTGCGCAC GCTGACCATC ATCGACTGGG CACTGGAGAT GGTCGATACG
GTGCGCGCCC GCGAAGGCCA GGGGCCGCTG GACATCGCCT CGATCCCGCT GGATGACGTG
CCCACCTTCG ACATGCTCAA GAAGGCCGAG ACCACGGCGG TCTTCCAGCT CGAATCGCGC
GGCATGAAGG AGCTGATCAA GCGCCTGCAG CCCGACTCGC TGGAAGACAT GATCGCCCTG
GTGGCCCTGT TCCGGCCGGG GCCGCTGCAG TCCGGCATGG TCGACGACTT CATCAACCGC
AAGCACGGGC GTGCCGAAGT CGCCTATCCT CACCCGGACT ATCAGCATGA GCTGCTCAAG
CCGGTGCTCG AGCCCACCTA CGGTATCATC CTCTATCAGG AGCAGGTGAT GCAGATCGCC
CAGGTGCTGG CGGGCTACAG CCTGGGGCAG GCCGACATGC TGCGTCGCGC CATGGGCAAG
AAGAAGCCCG AGGAGATGGC CAAGCAGCGC GCCGGCTTCA TGGAAGGGTG CGCGGCCAAC
GGCATCGACA AGGACCTGGC CGGCAACCTC TTCGACCTGG TGGAGAAATT CGCCGGCTAC
GGGTTCAACA AGTCGCACTC GGCGGCCTAC GGGCTGGTCT CGTACCAGAC GGCGTGGCTC
AAGGCGCACT ATCCCGCGCC CTTCATGGCG GCGGTGCTGT CCACCGAGAT GGACAACCTC
GACAAGGTCG TGCCGCTGAT CGAGGAATGT CGCAACCAGG GACTGACGGT CACGCCGCCC
GACGTCAACA TGGGCAGCTA CAAGTTCACC GTCGACGAGC AGGGACGCGT GGTCTACGGC
CTGGGCGCGA TTCGCGGCGT GGGCGAGGGC CCCATCGGCG CGATCGTCGA GGCGCGCGAG
GCGGACGGCG CCTTCAGCGA CCTGTTCGAC TTCTGCCGCC GCGTCGATGC CAAGCGCCTC
AACAAGCGTA CCCTGGAAGC GCTGATCCGC TCCGGTGCGC TGGACAATCT CGGCCCCACC
CGCGCGGTGC TGATGGCCTC GCTGGAGGCG GCGCTCAAGG CCGCCGCGCA GAGCACCACC
AATGCCAACC TGGGCATGAT GGACATGTTC GGCGAAGCGT TCAGCGAGCC CGAAGCCGGC
GACGCCTACG CCGACTATCG CGGGGTGCGC GAATGGACCG ACAAGGAGCG CCTGGCCGGC
GAAAAGGACA CGCTGGGCCT GTATCTGACC GGCCACCCCA TCGATGAGTA CGAATCCGAA
CTCAAGCGCT TCGTGTCGAC GCGCATCGTC GACTTGAAGC CCCAGCGGGG CGAGTCGCAG
CGGGTCGCGG GGCTGGTCGT GGCCATGCGC ACCATGAAGT CCAAGCGTGG CGACACCATG
GCGTTCATCA CCCTGGATGA CCGTACCGGT CGAATCGAGG CATCGCTGTT CGGCGAGATG
TTCGAGCAGG TTCGCGGCAA GCTCGGCACC GACGAGGTCC TGATCATCGA AGGCGAGGTG
AGCACCGACG ACTACTCGGG CGGACTGCGG CTGCGAGGCA AGGAAGTCAC GCCGATGGTC
GACGCGCGCA CCCGTTATGG CGAGGCCGTG GAACTCACCG TGGACGGAAC GCGTCTCAAT
GGACGCTTCG CGCGCAGTCT GCACGACAGC TTGACGCCAT GGTGCGATCC TCAGGGCCTG
CCGGTGCGCG TGCGTTATCG CAACCCCGAG GCCAGCGGTG TGCTGGAACT CGGCGCGCCC
TGGCGCGTGG CGCCCAGCGA CGACCTGCTC ATCGCCCTGC GCGAGGTAGA GGGGCAGGAG
GCGGTCACGC TGCACTATCG AGGCTGA
 
Protein sequence
MTTPFVHLRV HTEYSLVDGL VRLKPLIEAT VEGGMPAVAV TDDSNLFGLV KTYKAAQGAG 
LKPVIGADLW MENPHDEEHP YRVTLLAMDN DGYRHLTELI SQGWSEGQQR GQGILKKEWI
FARSAGLIAL SGARDGEIGR YLLSEHGQAA RELCEGWKAA FPGRFYLEVQ RTGREHDEEC
LHLSVALAAE TETPVVATND VRFLTREDYW AHETRVAIGE GKALDDPRRE RRYSEEQYLK
SPQEMAELFS DLPEALENSV MIAARCNVDV PLGEIFLPEY PVPDGMSMDG FFRKISHDGL
TERLDKLFSG ENPIYPGRDL AEYEPAYRER LDFELNIILE MGFPGYFLIV MDFIQWAKDN
DIPVGPGRGS GAGSLVAYAL KITDLDPLEY DLLFERFLNP ERVSMPDFDV DFCMEKRDRV
IEYVASRYGR DAVSQIVTFG TMAAKAVVRD VARAQGKPYS MGDKLSKLIP FEVGMTLAKA
IEQEPALKEY LDSDEESQEI WDMALKLEGI TRGTGKHAGG VVIAPTKLTD FSPLLCDEDG
SGLVVQYDKN DIEEAGLVKF DFLGLRTLTI IDWALEMVDT VRAREGQGPL DIASIPLDDV
PTFDMLKKAE TTAVFQLESR GMKELIKRLQ PDSLEDMIAL VALFRPGPLQ SGMVDDFINR
KHGRAEVAYP HPDYQHELLK PVLEPTYGII LYQEQVMQIA QVLAGYSLGQ ADMLRRAMGK
KKPEEMAKQR AGFMEGCAAN GIDKDLAGNL FDLVEKFAGY GFNKSHSAAY GLVSYQTAWL
KAHYPAPFMA AVLSTEMDNL DKVVPLIEEC RNQGLTVTPP DVNMGSYKFT VDEQGRVVYG
LGAIRGVGEG PIGAIVEARE ADGAFSDLFD FCRRVDAKRL NKRTLEALIR SGALDNLGPT
RAVLMASLEA ALKAAAQSTT NANLGMMDMF GEAFSEPEAG DAYADYRGVR EWTDKERLAG
EKDTLGLYLT GHPIDEYESE LKRFVSTRIV DLKPQRGESQ RVAGLVVAMR TMKSKRGDTM
AFITLDDRTG RIEASLFGEM FEQVRGKLGT DEVLIIEGEV STDDYSGGLR LRGKEVTPMV
DARTRYGEAV ELTVDGTRLN GRFARSLHDS LTPWCDPQGL PVRVRYRNPE ASGVLELGAP
WRVAPSDDLL IALREVEGQE AVTLHYRG