Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0578 |
Symbol | dnaE |
ID | 4026315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 640374 |
End bp | 643880 |
Gene Length | 3507 bp |
Protein Length | 1168 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637965746 |
Product | DNA polymerase III subunit alpha |
Protein accession | YP_572639 |
Protein GI | 92112711 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACGC CTTTCGTACA CCTGCGCGTC CACACCGAAT ATTCCCTGGT CGATGGCCTG GTACGCTTGA AGCCGTTGAT CGAAGCGACG GTCGAGGGCG GCATGCCGGC CGTGGCCGTG ACCGACGATT CCAATCTGTT CGGCCTGGTC AAGACCTACA AGGCGGCGCA AGGAGCGGGG CTCAAGCCGG TCATCGGGGC CGACCTGTGG ATGGAAAACC CCCATGACGA AGAGCACCCC TACCGGGTCA CGCTGCTGGC GATGGACAAC GACGGCTACC GTCACCTGAC CGAACTGATC TCGCAAGGCT GGAGCGAAGG TCAGCAGCGC GGCCAGGGCA TCCTCAAGAA GGAATGGATC TTTGCCCGCA GCGCGGGCCT GATCGCGCTT TCCGGGGCCC GCGACGGCGA GATCGGCCGT TACCTGCTAT CCGAGCACGG TCAGGCCGCG CGCGAGCTGT GCGAGGGCTG GAAGGCCGCC TTTCCGGGGC GCTTCTATCT GGAAGTCCAG CGTACCGGCC GCGAGCACGA CGAGGAGTGC CTGCATCTGT CGGTGGCCCT GGCGGCCGAG ACCGAGACGC CGGTGGTGGC GACCAACGAC GTGCGCTTCC TGACCCGTGA GGACTACTGG GCCCACGAGA CGCGGGTGGC GATCGGCGAG GGCAAGGCGC TCGACGACCC CAGGCGCGAG CGCCGCTACA GCGAAGAGCA GTACCTGAAG AGTCCGCAGG AGATGGCGGA GCTGTTCTCG GACCTGCCCG AGGCACTGGA AAACAGCGTG ATGATCGCCG CGCGCTGCAA CGTCGACGTG CCGCTGGGAG AAATCTTCCT GCCCGAGTAC CCGGTGCCGG ACGGCATGAG CATGGACGGC TTCTTCCGCA AGATTTCCCA TGACGGCCTG ACCGAGCGGC TCGACAAGCT GTTCTCCGGC GAGAACCCGA TCTACCCCGG CCGCGACCTC GCCGAGTACG AACCGGCCTA CCGCGAGCGT CTCGACTTCG AGCTCAACAT CATCCTCGAG ATGGGCTTCC CCGGGTACTT CCTGATCGTC ATGGACTTCA TCCAGTGGGC CAAGGACAAC GACATTCCGG TGGGCCCGGG GCGCGGGTCC GGGGCGGGGT CGCTGGTCGC CTATGCGCTC AAGATCACCG ACCTCGACCC GCTGGAATAC GACCTGCTGT TCGAGCGCTT CCTCAACCCC GAGCGCGTGT CGATGCCCGA CTTCGACGTC GACTTCTGCA TGGAAAAGCG CGACCGGGTC ATCGAGTACG TGGCGAGTCG CTACGGCCGC GATGCCGTCT CGCAGATCGT CACCTTCGGC ACCATGGCCG CCAAGGCCGT GGTCCGCGAC GTGGCGCGCG CCCAGGGCAA ACCGTACTCG ATGGGCGACA AGCTCTCCAA GCTGATCCCC TTCGAGGTCG GCATGACCCT GGCCAAGGCC ATCGAGCAGG AGCCGGCGCT CAAGGAATAC CTGGACAGCG ACGAGGAGTC CCAGGAAATC TGGGACATGG CGCTCAAGCT CGAGGGCATC ACGCGCGGGA CCGGCAAGCA CGCCGGCGGG GTGGTGATCG CGCCCACCAA GCTCACCGAT TTCTCGCCGC TGCTGTGCGA TGAGGACGGC AGCGGCCTGG TCGTCCAGTA CGACAAGAAC GACATCGAGG AAGCCGGGCT GGTCAAGTTC GACTTTCTGG GGCTGCGCAC GCTGACCATC ATCGACTGGG CACTGGAGAT GGTCGATACG GTGCGCGCCC GCGAAGGCCA GGGGCCGCTG GACATCGCCT CGATCCCGCT GGATGACGTG CCCACCTTCG ACATGCTCAA GAAGGCCGAG ACCACGGCGG TCTTCCAGCT CGAATCGCGC GGCATGAAGG AGCTGATCAA GCGCCTGCAG CCCGACTCGC TGGAAGACAT GATCGCCCTG GTGGCCCTGT TCCGGCCGGG GCCGCTGCAG TCCGGCATGG TCGACGACTT CATCAACCGC AAGCACGGGC GTGCCGAAGT CGCCTATCCT CACCCGGACT ATCAGCATGA GCTGCTCAAG CCGGTGCTCG AGCCCACCTA CGGTATCATC CTCTATCAGG AGCAGGTGAT GCAGATCGCC CAGGTGCTGG CGGGCTACAG CCTGGGGCAG GCCGACATGC TGCGTCGCGC CATGGGCAAG AAGAAGCCCG AGGAGATGGC CAAGCAGCGC GCCGGCTTCA TGGAAGGGTG CGCGGCCAAC GGCATCGACA AGGACCTGGC CGGCAACCTC TTCGACCTGG TGGAGAAATT CGCCGGCTAC GGGTTCAACA AGTCGCACTC GGCGGCCTAC GGGCTGGTCT CGTACCAGAC GGCGTGGCTC AAGGCGCACT ATCCCGCGCC CTTCATGGCG GCGGTGCTGT CCACCGAGAT GGACAACCTC GACAAGGTCG TGCCGCTGAT CGAGGAATGT CGCAACCAGG GACTGACGGT CACGCCGCCC GACGTCAACA TGGGCAGCTA CAAGTTCACC GTCGACGAGC AGGGACGCGT GGTCTACGGC CTGGGCGCGA TTCGCGGCGT GGGCGAGGGC CCCATCGGCG CGATCGTCGA GGCGCGCGAG GCGGACGGCG CCTTCAGCGA CCTGTTCGAC TTCTGCCGCC GCGTCGATGC CAAGCGCCTC AACAAGCGTA CCCTGGAAGC GCTGATCCGC TCCGGTGCGC TGGACAATCT CGGCCCCACC CGCGCGGTGC TGATGGCCTC GCTGGAGGCG GCGCTCAAGG CCGCCGCGCA GAGCACCACC AATGCCAACC TGGGCATGAT GGACATGTTC GGCGAAGCGT TCAGCGAGCC CGAAGCCGGC GACGCCTACG CCGACTATCG CGGGGTGCGC GAATGGACCG ACAAGGAGCG CCTGGCCGGC GAAAAGGACA CGCTGGGCCT GTATCTGACC GGCCACCCCA TCGATGAGTA CGAATCCGAA CTCAAGCGCT TCGTGTCGAC GCGCATCGTC GACTTGAAGC CCCAGCGGGG CGAGTCGCAG CGGGTCGCGG GGCTGGTCGT GGCCATGCGC ACCATGAAGT CCAAGCGTGG CGACACCATG GCGTTCATCA CCCTGGATGA CCGTACCGGT CGAATCGAGG CATCGCTGTT CGGCGAGATG TTCGAGCAGG TTCGCGGCAA GCTCGGCACC GACGAGGTCC TGATCATCGA AGGCGAGGTG AGCACCGACG ACTACTCGGG CGGACTGCGG CTGCGAGGCA AGGAAGTCAC GCCGATGGTC GACGCGCGCA CCCGTTATGG CGAGGCCGTG GAACTCACCG TGGACGGAAC GCGTCTCAAT GGACGCTTCG CGCGCAGTCT GCACGACAGC TTGACGCCAT GGTGCGATCC TCAGGGCCTG CCGGTGCGCG TGCGTTATCG CAACCCCGAG GCCAGCGGTG TGCTGGAACT CGGCGCGCCC TGGCGCGTGG CGCCCAGCGA CGACCTGCTC ATCGCCCTGC GCGAGGTAGA GGGGCAGGAG GCGGTCACGC TGCACTATCG AGGCTGA
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Protein sequence | MTTPFVHLRV HTEYSLVDGL VRLKPLIEAT VEGGMPAVAV TDDSNLFGLV KTYKAAQGAG LKPVIGADLW MENPHDEEHP YRVTLLAMDN DGYRHLTELI SQGWSEGQQR GQGILKKEWI FARSAGLIAL SGARDGEIGR YLLSEHGQAA RELCEGWKAA FPGRFYLEVQ RTGREHDEEC LHLSVALAAE TETPVVATND VRFLTREDYW AHETRVAIGE GKALDDPRRE RRYSEEQYLK SPQEMAELFS DLPEALENSV MIAARCNVDV PLGEIFLPEY PVPDGMSMDG FFRKISHDGL TERLDKLFSG ENPIYPGRDL AEYEPAYRER LDFELNIILE MGFPGYFLIV MDFIQWAKDN DIPVGPGRGS GAGSLVAYAL KITDLDPLEY DLLFERFLNP ERVSMPDFDV DFCMEKRDRV IEYVASRYGR DAVSQIVTFG TMAAKAVVRD VARAQGKPYS MGDKLSKLIP FEVGMTLAKA IEQEPALKEY LDSDEESQEI WDMALKLEGI TRGTGKHAGG VVIAPTKLTD FSPLLCDEDG SGLVVQYDKN DIEEAGLVKF DFLGLRTLTI IDWALEMVDT VRAREGQGPL DIASIPLDDV PTFDMLKKAE TTAVFQLESR GMKELIKRLQ PDSLEDMIAL VALFRPGPLQ SGMVDDFINR KHGRAEVAYP HPDYQHELLK PVLEPTYGII LYQEQVMQIA QVLAGYSLGQ ADMLRRAMGK KKPEEMAKQR AGFMEGCAAN GIDKDLAGNL FDLVEKFAGY GFNKSHSAAY GLVSYQTAWL KAHYPAPFMA AVLSTEMDNL DKVVPLIEEC RNQGLTVTPP DVNMGSYKFT VDEQGRVVYG LGAIRGVGEG PIGAIVEARE ADGAFSDLFD FCRRVDAKRL NKRTLEALIR SGALDNLGPT RAVLMASLEA ALKAAAQSTT NANLGMMDMF GEAFSEPEAG DAYADYRGVR EWTDKERLAG EKDTLGLYLT GHPIDEYESE LKRFVSTRIV DLKPQRGESQ RVAGLVVAMR TMKSKRGDTM AFITLDDRTG RIEASLFGEM FEQVRGKLGT DEVLIIEGEV STDDYSGGLR LRGKEVTPMV DARTRYGEAV ELTVDGTRLN GRFARSLHDS LTPWCDPQGL PVRVRYRNPE ASGVLELGAP WRVAPSDDLL IALREVEGQE AVTLHYRG
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