| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0557 |
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| Symbol | |
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| ID | 4026158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 617624 |
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| End bp | 618784 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637965725 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_572618 |
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| Protein GI | 92112690 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACAA CTGAGGCTGA CACCACACCG GCATCGGCGA CGCTGGCGCT GGCCTTCGAC
TTGCTCCGGC GCCACTCGGT GACGCCGAAC GACGCCGGTT GCCAGGCACT GATGATCGAG
CGCCTGGAAC GCCTGGGCTT CCAGGTCGAG CGCCTGCGCA TCGGCGAAGT GGACAACTTC
TGGGCCACGC GGGGGGAGAC GGGCCCCCTG CTGGTCTTCG CCGGCCACAC CGACGTGGTG
CCCACCGGCC CCGAAAGCGA CTGGCAGTAT CCGCCCTTCA CGCCGCGCAT CGATGCCGAT
GGCATGCTGT GCGGGCGCGG CGCGGCGGAC ATGAAAGGTA GCCTGGCGGC GATGGTCACC
GCCGTGGAGA CCTTCATCGA GGCGCATCCG GACCACCACG GTCGCCTGGG CTTTCTGATC
ACCGCCGACG AGGAAGGGCC CGCCGTTCAC GGCACCCGCG CGGTGGTCGA GCACCTGCGT
GAAAAAGGGG TCGCGCCCGA TTACTGCATC GTCGGCGAGC CCTCGTCCAG CGAGCGCCTG
GGCGATACCC TCAAGAACGG CCGCCGGGGC TCGCTCGGCG GCACCCTGCG CGTCAAGGGC
GTACAGGGCC ATGTCGCCTA TCCCCACCTG GCACGCAATC CCGTCCACGA GGCAGCCCCG
GCCCTGGCGG CCCTGGCCGA GGCCCAGTGG GACGCCGGCA ACGCCTTCTT TCCCGCGACC
AGCTTCCAGA TCTCCAACCT CCAGGCCGGT ACCGGGGCCA GCAACGTCAT TCCCGGGCAG
CTGGAGGCGG TATTCAACTT CCGTTTCTCG ACGGAGGTCA CCGCCGAGGC CCTGAAGGCG
CGCACCACCG AGATACTGGA CCGCTTCGCG CTCGACTACA CGATCGACTG GACGCTCAAT
GGCGAACCGT TCCTCACCAC CGAGGGCGCG CTGATCGACG CCACCGTCGC CAGCGTAGAG
GACGTGCTGG GCTACCGGCC GCAGCTGTCG ACCGGCGGCG GCACCTCGGA CGGGCGTTTC
ATCGCCACGC TGGGCGCCCA GGTGATCGAG CTCGGCCCGG TCAACGCCAC GATCCACAAG
GTCGATGAAC GAATACGCGC CGCCGACCTG GAGACGCTGA GCCGTCTCTA TGCGACCATC
ATGCAACGCT TGTTCACCTG A
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| Protein sequence | MPTTEADTTP ASATLALAFD LLRRHSVTPN DAGCQALMIE RLERLGFQVE RLRIGEVDNF
WATRGETGPL LVFAGHTDVV PTGPESDWQY PPFTPRIDAD GMLCGRGAAD MKGSLAAMVT
AVETFIEAHP DHHGRLGFLI TADEEGPAVH GTRAVVEHLR EKGVAPDYCI VGEPSSSERL
GDTLKNGRRG SLGGTLRVKG VQGHVAYPHL ARNPVHEAAP ALAALAEAQW DAGNAFFPAT
SFQISNLQAG TGASNVIPGQ LEAVFNFRFS TEVTAEALKA RTTEILDRFA LDYTIDWTLN
GEPFLTTEGA LIDATVASVE DVLGYRPQLS TGGGTSDGRF IATLGAQVIE LGPVNATIHK
VDERIRAADL ETLSRLYATI MQRLFT
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