Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0543 |
Symbol | |
ID | 4027682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 601970 |
End bp | 602647 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637965711 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_572604 |
Protein GI | 92112676 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0262694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCATCC CGGCCCAACC GTTCGTGACT CGCCTGGCCG ATGGCGGTGT CTTTCCCCAT ATGCTGGGCA AGATCGTCTG CGTGGGGCGC AACTACGCCG AGCACGCCCG TGAACTCGAC AACCCGGTGC CCAGTGCGCC GCTGCTATTC ATCAAGCCTG CCACCAGCGC GGTGCCCATG GCACATGACA TCGCTGAGCC ATTCACGCGT GGCGAGGTAC ATTTCGAGAC GGAGCTGGCG CTGCTGATCG GCAAGCGTCT GAGCGGGGCG AGTGCCGAAG CCGCGCAGCA AGCGGTCGCG GGCCTCGGGC TGGCGCTGGA CCTGACGCTG CGCGACGTGC AGTCGCAATT GAAGGAAAAG GGGCACCCCT GGGAAATCGC CAAGGCCTTC GACGGGGCCT GTCCGCTGTC ACCGTTCGTG GCGTTGCACG AGGTGCCCGA CTGGGCGGCA TTGCGCTTCA CGCTGGATAT CGACGGCGAG CGCCGTCAGA CCGGCGAGAC GCGTGACATG CTGTTCGCGA TTCCCGAGTT GCTGGCCGAG ATGTCGCGCC ACTTCACGTT GCAGCCCGGC GATGTCGTGC TCACCGGGAC GCCGGCCGGT GTGGGCCCCT TGCCGCGCAA CGCGCGCTTG TCGCTGCAGG CCTCGTTCGG GCTGGAGGTC TCCACCCGAA CGCGGTGA
|
Protein sequence | MSIPAQPFVT RLADGGVFPH MLGKIVCVGR NYAEHARELD NPVPSAPLLF IKPATSAVPM AHDIAEPFTR GEVHFETELA LLIGKRLSGA SAEAAQQAVA GLGLALDLTL RDVQSQLKEK GHPWEIAKAF DGACPLSPFV ALHEVPDWAA LRFTLDIDGE RRQTGETRDM LFAIPELLAE MSRHFTLQPG DVVLTGTPAG VGPLPRNARL SLQASFGLEV STRTR
|
| |