Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0497 |
Symbol | |
ID | 4026867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 544997 |
End bp | 545974 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637965656 |
Product | ribosomal large subunit pseudouridine synthase D |
Protein accession | YP_572558 |
Protein GI | 92112630 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.553412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACCGA GCATTGCCAT GGCAGATACC GTGCAGCGAG AAGAACGCGT CCCCGACACC ATGATCGGCC TGCGCCTGGA TCAAGCCGCC GCCGAGCTGT TCGCGGACTT CTCCCGCGAG CGTCTCAAGG CCTGGATCAA GTCGGGCGCA TTGACCCGGG ACGGCGCGCC TGCGCGGCCC AAGGACAAGC TGTTCGGTGG CGAGCGGCTG ACGCTCGAGG CCACGCTCGA GGAAGACACG CGCTTCGCAC CGCAGGCCAT GGCGCTGTCG ATCGTCCACG AAGACGACGA TGTTCTGGTC ATCGACAAGC CCGCGGGGCT GGTCGTGCAT CCGGCCGCCG GCAATCCCGA TGGCACCTTG CTCAATGCCT TGCTGCACCA TGCGCCGGGA CAGATGCAAC TGCCCCGTGC CGGGATCGTG CATCGTCTCG ACAAGGACAC CACCGGCCTG ATGGTGGTTG CCAAGACGCT GGCTGCGCAT GCCTCGCTGG TCGAGCAGTT GCAGGCACGT ACGGTATCGC GTGAGTACGA TGCCGTGGTG ACCGGCAGGA TGACGGCCGG TGGCAGTGTC GATGCACCGA TCGGCCGCCA TCCCAAGGAT CGCAAGCGCC AGGCGGTCAC CCCGTCGGGC AAGCCGGCGG TGACGCATTA CCGCGTGGTG GAGCGCTTTC CCGCTCACAC CCATGTGCGC TGCCGGCTCG AAACCGGGCG CACCCACCAG ATTCGCGTGC ATATGGCGCA TCGGCGCTTT CCGCTGATCG GCGATCCGGT CTATGCCGGG CGCCTCAAGA TGCCGGCCGG CGCCACCGAC GCACTGAAGG ACGTGCTGCG TCATTTTCCG CGTCAGGCGC TGCATGCTCG CAAACTGGCC TTCGTGCATC CCGGCACGGG CGAGACGCTG ACGTTTCGCG CGCCCTTGCC CGACGATATG CTGATGTTGC TGGATTTCCT GCGCGATGCA GCCGACACGC CGACCTGA
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Protein sequence | MEPSIAMADT VQREERVPDT MIGLRLDQAA AELFADFSRE RLKAWIKSGA LTRDGAPARP KDKLFGGERL TLEATLEEDT RFAPQAMALS IVHEDDDVLV IDKPAGLVVH PAAGNPDGTL LNALLHHAPG QMQLPRAGIV HRLDKDTTGL MVVAKTLAAH ASLVEQLQAR TVSREYDAVV TGRMTAGGSV DAPIGRHPKD RKRQAVTPSG KPAVTHYRVV ERFPAHTHVR CRLETGRTHQ IRVHMAHRRF PLIGDPVYAG RLKMPAGATD ALKDVLRHFP RQALHARKLA FVHPGTGETL TFRAPLPDDM LMLLDFLRDA ADTPT
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