Gene Csal_0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0497 
Symbol 
ID4026867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp544997 
End bp545974 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID637965656 
Productribosomal large subunit pseudouridine synthase D 
Protein accessionYP_572558 
Protein GI92112630 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.553412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCGA GCATTGCCAT GGCAGATACC GTGCAGCGAG AAGAACGCGT CCCCGACACC 
ATGATCGGCC TGCGCCTGGA TCAAGCCGCC GCCGAGCTGT TCGCGGACTT CTCCCGCGAG
CGTCTCAAGG CCTGGATCAA GTCGGGCGCA TTGACCCGGG ACGGCGCGCC TGCGCGGCCC
AAGGACAAGC TGTTCGGTGG CGAGCGGCTG ACGCTCGAGG CCACGCTCGA GGAAGACACG
CGCTTCGCAC CGCAGGCCAT GGCGCTGTCG ATCGTCCACG AAGACGACGA TGTTCTGGTC
ATCGACAAGC CCGCGGGGCT GGTCGTGCAT CCGGCCGCCG GCAATCCCGA TGGCACCTTG
CTCAATGCCT TGCTGCACCA TGCGCCGGGA CAGATGCAAC TGCCCCGTGC CGGGATCGTG
CATCGTCTCG ACAAGGACAC CACCGGCCTG ATGGTGGTTG CCAAGACGCT GGCTGCGCAT
GCCTCGCTGG TCGAGCAGTT GCAGGCACGT ACGGTATCGC GTGAGTACGA TGCCGTGGTG
ACCGGCAGGA TGACGGCCGG TGGCAGTGTC GATGCACCGA TCGGCCGCCA TCCCAAGGAT
CGCAAGCGCC AGGCGGTCAC CCCGTCGGGC AAGCCGGCGG TGACGCATTA CCGCGTGGTG
GAGCGCTTTC CCGCTCACAC CCATGTGCGC TGCCGGCTCG AAACCGGGCG CACCCACCAG
ATTCGCGTGC ATATGGCGCA TCGGCGCTTT CCGCTGATCG GCGATCCGGT CTATGCCGGG
CGCCTCAAGA TGCCGGCCGG CGCCACCGAC GCACTGAAGG ACGTGCTGCG TCATTTTCCG
CGTCAGGCGC TGCATGCTCG CAAACTGGCC TTCGTGCATC CCGGCACGGG CGAGACGCTG
ACGTTTCGCG CGCCCTTGCC CGACGATATG CTGATGTTGC TGGATTTCCT GCGCGATGCA
GCCGACACGC CGACCTGA
 
Protein sequence
MEPSIAMADT VQREERVPDT MIGLRLDQAA AELFADFSRE RLKAWIKSGA LTRDGAPARP 
KDKLFGGERL TLEATLEEDT RFAPQAMALS IVHEDDDVLV IDKPAGLVVH PAAGNPDGTL
LNALLHHAPG QMQLPRAGIV HRLDKDTTGL MVVAKTLAAH ASLVEQLQAR TVSREYDAVV
TGRMTAGGSV DAPIGRHPKD RKRQAVTPSG KPAVTHYRVV ERFPAHTHVR CRLETGRTHQ
IRVHMAHRRF PLIGDPVYAG RLKMPAGATD ALKDVLRHFP RQALHARKLA FVHPGTGETL
TFRAPLPDDM LMLLDFLRDA ADTPT